Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm25222-201ENSMUST00000158199 126 ntBASIC1.51□□□□□ -2.17
Trim47Q8C0E3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Gm25307-201ENSMUST00000158885 106 ntBASIC1.5□□□□□ -2.17
Trim47Q8C0E3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.5□□□□□ -2.17
Trim47Q8C0E3 Gm44211-201ENSMUST00000204867 145 ntBASIC1.5□□□□□ -2.17
Trim47Q8C0E3 Gm22559-201ENSMUST00000157329 134 ntBASIC1.49□□□□□ -2.17
Trim47Q8C0E3 Mir7010-201ENSMUST00000183464 63 ntBASIC1.49□□□□□ -2.17
Trim47Q8C0E3 Mir6394-201ENSMUST00000184738 99 ntBASIC1.49□□□□□ -2.17
Trim47Q8C0E3 Gm22298-201ENSMUST00000082662 133 ntBASIC1.49□□□□□ -2.17
Trim47Q8C0E3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Gm22233-201ENSMUST00000157464 114 ntBASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Snord13-201ENSMUST00000157627 104 ntBASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Gm26306-201ENSMUST00000157773 119 ntBASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Gm25868-201ENSMUST00000158253 114 ntBASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Gm16399-201ENSMUST00000181423 219 ntBASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Gm27263-201ENSMUST00000184760 76 ntBASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Gm6607-201ENSMUST00000215035 328 ntBASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Gm22127-201ENSMUST00000083239 106 ntBASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Gm23245-201ENSMUST00000083370 135 ntBASIC1.48□□□□□ -2.17
Trim47Q8C0E3 Gm26052-201ENSMUST00000104646 84 ntBASIC1.47□□□□□ -2.17
Trim47Q8C0E3 Gm27587-201ENSMUST00000185116 163 ntBASIC1.47□□□□□ -2.17
Trim47Q8C0E3 Gm25296-201ENSMUST00000082566 67 ntBASIC1.47□□□□□ -2.17
Trim47Q8C0E3 Mir200b-201ENSMUST00000083615 70 ntBASIC1.47□□□□□ -2.17
Trim47Q8C0E3 Gm23328-201ENSMUST00000157418 132 ntBASIC1.46□□□□□ -2.18
Trim47Q8C0E3 Gm22542-201ENSMUST00000158166 95 ntBASIC1.46□□□□□ -2.18
Trim47Q8C0E3 Mir7063-201ENSMUST00000184158 91 ntBASIC1.46□□□□□ -2.18
Trim47Q8C0E3 Gm27656-201ENSMUST00000185055 80 ntBASIC1.46□□□□□ -2.18
Trim47Q8C0E3 Gm24342-201ENSMUST00000103907 104 ntBASIC1.45□□□□□ -2.18
Trim47Q8C0E3 Gm23573-201ENSMUST00000104408 107 ntBASIC1.45□□□□□ -2.18
Trim47Q8C0E3 Gm23020-201ENSMUST00000158766 253 ntBASIC1.45□□□□□ -2.18
Trim47Q8C0E3 Gm24321-201ENSMUST00000175348 80 ntBASIC1.45□□□□□ -2.18
Trim47Q8C0E3 Gm23340-201ENSMUST00000158955 123 ntBASIC1.44□□□□□ -2.18
Trim47Q8C0E3 Gm42506-201ENSMUST00000202009 150 ntBASIC1.44□□□□□ -2.18
Trim47Q8C0E3 Gm25138-201ENSMUST00000083248 136 ntBASIC1.44□□□□□ -2.18
Trim47Q8C0E3 Mir211-201ENSMUST00000083651 106 ntBASIC1.44□□□□□ -2.18
Trim47Q8C0E3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trim47Q8C0E3 Gm24796-201ENSMUST00000104007 107 ntBASIC1.43□□□□□ -2.18
Trim47Q8C0E3 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.43□□□□□ -2.18
Trim47Q8C0E3 Mir1954-201ENSMUST00000175595 86 ntBASIC1.43□□□□□ -2.18
Trim47Q8C0E3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.43□□□□□ -2.18
Trim47Q8C0E3 Gm25894-201ENSMUST00000083458 75 ntBASIC1.43□□□□□ -2.18
Trim47Q8C0E3 Snord71-201ENSMUST00000104361 85 ntBASIC1.42□□□□□ -2.18
Trim47Q8C0E3 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.42□□□□□ -2.18
Trim47Q8C0E3 Mir6985-201ENSMUST00000184641 61 ntBASIC1.42□□□□□ -2.18
Trim47Q8C0E3 Mir23a-201ENSMUST00000083677 75 ntBASIC1.42□□□□□ -2.18
Trim47Q8C0E3 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.41□□□□□ -2.18
Trim47Q8C0E3 Gm24297-201ENSMUST00000158300 68 ntBASIC1.41□□□□□ -2.18
Trim47Q8C0E3 Gm44327-201ENSMUST00000200068 117 ntBASIC1.41□□□□□ -2.18
Trim47Q8C0E3 AC125190.3-201ENSMUST00000223224 121 ntBASIC1.41□□□□□ -2.18
Trim47Q8C0E3 Gm23347-201ENSMUST00000083823 82 ntBASIC1.41□□□□□ -2.18
Trim47Q8C0E3 Gm22780-201ENSMUST00000104084 132 ntBASIC1.4□□□□□ -2.19
Trim47Q8C0E3 Gm23636-201ENSMUST00000175070 95 ntBASIC1.4□□□□□ -2.19
Trim47Q8C0E3 Gm42533-201ENSMUST00000196247 157 ntBASIC1.4□□□□□ -2.19
Trim47Q8C0E3 Mir196b-201ENSMUST00000083509 85 ntBASIC1.4□□□□□ -2.19
Trim47Q8C0E3 Gm23494-201ENSMUST00000116830 126 ntBASIC1.39□□□□□ -2.19
Trim47Q8C0E3 Gm23017-201ENSMUST00000177583 72 ntBASIC1.39□□□□□ -2.19
Trim47Q8C0E3 Mir181b-1-201ENSMUST00000083524 80 ntBASIC1.39□□□□□ -2.19
Trim47Q8C0E3 Gm44458-201ENSMUST00000196594 143 ntBASIC1.38□□□□□ -2.19
Trim47Q8C0E3 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trim47Q8C0E3 Mir344-201ENSMUST00000083634 95 ntBASIC1.38□□□□□ -2.19
Trim47Q8C0E3 Gm22074-201ENSMUST00000158595 113 ntBASIC1.37□□□□□ -2.19
Trim47Q8C0E3 Mir15a-201ENSMUST00000175266 84 ntBASIC1.37□□□□□ -2.19
Trim47Q8C0E3 Gm27943-201ENSMUST00000184844 116 ntBASIC1.37□□□□□ -2.19
Trim47Q8C0E3 mt-Tw-201ENSMUST00000082397 67 ntBASIC1.36□□□□□ -2.19
Trim47Q8C0E3 Gm24920-201ENSMUST00000083018 85 ntBASIC1.36□□□□□ -2.19
Trim47Q8C0E3 Gm25128-201ENSMUST00000083339 76 ntBASIC1.36□□□□□ -2.19
Trim47Q8C0E3 Gm22565-201ENSMUST00000175540 69 ntBASIC1.35□□□□□ -2.19
Trim47Q8C0E3 Snora62-201ENSMUST00000082991 149 ntBASIC1.35□□□□□ -2.19
Trim47Q8C0E3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Trim47Q8C0E3 Gm24252-201ENSMUST00000083700 132 ntBASIC1.34□□□□□ -2.19
Trim47Q8C0E3 Gm25522-201ENSMUST00000158394 105 ntBASIC1.33□□□□□ -2.2
Trim47Q8C0E3 Gm22431-201ENSMUST00000158545 107 ntBASIC1.33□□□□□ -2.2
Trim47Q8C0E3 Gm42845-201ENSMUST00000197766 105 ntBASIC1.33□□□□□ -2.2
Trim47Q8C0E3 Gm24555-201ENSMUST00000104548 124 ntBASIC1.32□□□□□ -2.2
Trim47Q8C0E3 Gm22485-201ENSMUST00000157990 109 ntBASIC1.32□□□□□ -2.2
Trim47Q8C0E3 Gm44455-201ENSMUST00000200061 82 ntBASIC1.32□□□□□ -2.2
Trim47Q8C0E3 Gm22302-201ENSMUST00000082657 106 ntBASIC1.32□□□□□ -2.2
Trim47Q8C0E3 Gm22357-201ENSMUST00000082882 83 ntBASIC1.32□□□□□ -2.2
Trim47Q8C0E3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.31□□□□□ -2.2
Trim47Q8C0E3 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trim47Q8C0E3 Gm25768-201ENSMUST00000158570 98 ntBASIC1.31□□□□□ -2.2
Trim47Q8C0E3 Mir101a-201ENSMUST00000083517 83 ntBASIC1.31□□□□□ -2.2
Trim47Q8C0E3 Gm25275-201ENSMUST00000104297 129 ntBASIC1.29□□□□□ -2.2
Trim47Q8C0E3 Mir3473d-201ENSMUST00000175346 81 ntBASIC1.28□□□□□ -2.2
Trim47Q8C0E3 Mir7663-201ENSMUST00000183950 61 ntBASIC1.28□□□□□ -2.2
Trim47Q8C0E3 Gm22455-201ENSMUST00000082580 71 ntBASIC1.28□□□□□ -2.2
Trim47Q8C0E3 Gm22303-201ENSMUST00000082686 122 ntBASIC1.28□□□□□ -2.2
Trim47Q8C0E3 Mir200a-201ENSMUST00000083466 90 ntBASIC1.27□□□□□ -2.21
Trim47Q8C0E3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.27□□□□□ -2.21
Trim47Q8C0E3 Gm25779-201ENSMUST00000116710 95 ntBASIC1.26□□□□□ -2.21
Trim47Q8C0E3 Gm25166-201ENSMUST00000158909 111 ntBASIC1.26□□□□□ -2.21
Trim47Q8C0E3 Gm27974-201ENSMUST00000183415 105 ntBASIC1.26□□□□□ -2.21
Trim47Q8C0E3 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1.26□□□□□ -2.21
Trim47Q8C0E3 Gm23787-201ENSMUST00000122538 73 ntBASIC1.25□□□□□ -2.21
Trim47Q8C0E3 Gm22980-201ENSMUST00000082608 70 ntBASIC1.25□□□□□ -2.21
Trim47Q8C0E3 Gm22469-201ENSMUST00000104118 133 ntBASIC1.24□□□□□ -2.21
Trim47Q8C0E3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trim47Q8C0E3 Mir10b-201ENSMUST00000083566 68 ntBASIC1.23□□□□□ -2.21
Trim47Q8C0E3 DQ267101-201ENSMUST00000082562 73 ntBASIC1.22□□□□□ -2.21
Trim47Q8C0E3 Gm25506-201ENSMUST00000104339 70 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 151.6 ms