Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm25802-201ENSMUST00000082639 77 ntBASIC2,54□□□□□ -2
Trim41Q5NCC3 Gm24165-201ENSMUST00000082718 128 ntBASIC2,54□□□□□ -2
Trim41Q5NCC3 Gm26467-201ENSMUST00000097257 78 ntBASIC2,54□□□□□ -2
Trim41Q5NCC3 Gm25375-201ENSMUST00000158157 135 ntBASIC2,53□□□□□ -2
Trim41Q5NCC3 Gm24942-201ENSMUST00000158328 114 ntBASIC2,53□□□□□ -2
Trim41Q5NCC3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC2,52□□□□□ -2,01
Trim41Q5NCC3 Gm25309-201ENSMUST00000116728 126 ntBASIC2,52□□□□□ -2,01
Trim41Q5NCC3 Gm45125-201ENSMUST00000206908 151 ntBASIC2,52□□□□□ -2,01
Trim41Q5NCC3 Gm24500-201ENSMUST00000158447 124 ntBASIC2,51□□□□□ -2,01
Trim41Q5NCC3 Gm38323-201ENSMUST00000192450 210 ntBASIC2,5□□□□□ -2,01
Trim41Q5NCC3 Gm26338-201ENSMUST00000102372 110 ntBASIC2,49□□□□□ -2,01
Trim41Q5NCC3 Gm23036-201ENSMUST00000157885 99 ntBASIC2,49□□□□□ -2,01
Trim41Q5NCC3 Gm22165-201ENSMUST00000158414 103 ntBASIC2,49□□□□□ -2,01
Trim41Q5NCC3 Gm24151-201ENSMUST00000082758 141 ntBASIC2,49□□□□□ -2,01
Trim41Q5NCC3 Mir92-2-201ENSMUST00000083679 91 ntBASIC2,49□□□□□ -2,01
Trim41Q5NCC3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC2,49□□□□□ -2,01
Trim41Q5NCC3 Mir3079-201ENSMUST00000175428 90 ntBASIC2,48□□□□□ -2,01
Trim41Q5NCC3 Gm22520-201ENSMUST00000158269 129 ntBASIC2,47□□□□□ -2,01
Trim41Q5NCC3 Snord57-201ENSMUST00000083338 72 ntBASIC2,47□□□□□ -2,01
Trim41Q5NCC3 U6.1-201ENSMUST00000157443 101 ntBASIC2,46□□□□□ -2,02
Trim41Q5NCC3 Gm22016-201ENSMUST00000158793 114 ntBASIC2,46□□□□□ -2,02
Trim41Q5NCC3 Gm27511-201ENSMUST00000183502 127 ntBASIC2,46□□□□□ -2,02
Trim41Q5NCC3 Gm23989-201ENSMUST00000117030 66 ntBASIC2,45□□□□□ -2,02
Trim41Q5NCC3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC2,45□□□□□ -2,02
Trim41Q5NCC3 Gm23416-201ENSMUST00000175520 95 ntBASIC2,44□□□□□ -2,02
Trim41Q5NCC3 Gm38274-201ENSMUST00000195689 148 ntBASIC2,44□□□□□ -2,02
Trim41Q5NCC3 AC129019.2-201ENSMUST00000222063 202 ntBASIC2,44□□□□□ -2,02
Trim41Q5NCC3 Gm24252-201ENSMUST00000083700 132 ntBASIC2,44□□□□□ -2,02
Trim41Q5NCC3 Gm22746-201ENSMUST00000082494 107 ntBASIC2,43□□□□□ -2,02
Trim41Q5NCC3 Mir717-201ENSMUST00000102259 109 ntBASIC2,42□□□□□ -2,02
Trim41Q5NCC3 Gm13577-201ENSMUST00000121365 205 ntBASIC2,42□□□□□ -2,02
Trim41Q5NCC3 Gm24262-201ENSMUST00000157431 144 ntBASIC2,42□□□□□ -2,02
Trim41Q5NCC3 Gm23221-201ENSMUST00000158118 93 ntBASIC2,42□□□□□ -2,02
Trim41Q5NCC3 Gm24710-201ENSMUST00000175235 101 ntBASIC2,42□□□□□ -2,02
Trim41Q5NCC3 Gm24135-201ENSMUST00000179085 101 ntBASIC2,42□□□□□ -2,02
Trim41Q5NCC3 Gm26306-201ENSMUST00000157773 119 ntBASIC2,41□□□□□ -2,02
Trim41Q5NCC3 Gm23853-201ENSMUST00000158375 104 ntBASIC2,41□□□□□ -2,02
Trim41Q5NCC3 Gm45754-201ENSMUST00000212380 279 ntBASIC2,41□□□□□ -2,02
Trim41Q5NCC3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC2,4□□□□□ -2,02
Trim41Q5NCC3 Mir653-201ENSMUST00000102402 85 ntBASIC2,4□□□□□ -2,03
Trim41Q5NCC3 Gm24377-201ENSMUST00000104398 131 ntBASIC2,4□□□□□ -2,03
Trim41Q5NCC3 Gm23020-201ENSMUST00000158766 253 ntBASIC2,4□□□□□ -2,03
Trim41Q5NCC3 Gm27980-201ENSMUST00000184094 169 ntBASIC2,4□□□□□ -2,03
Trim41Q5NCC3 Gm22720-201ENSMUST00000122710 87 ntBASIC2,39□□□□□ -2,03
Trim41Q5NCC3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC2,38□□□□□ -2,03
Trim41Q5NCC3 Gm44211-201ENSMUST00000204867 145 ntBASIC2,38□□□□□ -2,03
Trim41Q5NCC3 Gm25326-201ENSMUST00000101903 107 ntBASIC2,37□□□□□ -2,03
Trim41Q5NCC3 Gm24222-201ENSMUST00000158834 93 ntBASIC2,37□□□□□ -2,03
Trim41Q5NCC3 Gm22298-201ENSMUST00000082662 133 ntBASIC2,37□□□□□ -2,03
Trim41Q5NCC3 Gm23321-201ENSMUST00000104465 126 ntBASIC2,36□□□□□ -2,03
Trim41Q5NCC3 Gm22233-201ENSMUST00000157464 114 ntBASIC2,36□□□□□ -2,03
Trim41Q5NCC3 Gm25868-201ENSMUST00000158253 114 ntBASIC2,36□□□□□ -2,03
Trim41Q5NCC3 Gm25993-201ENSMUST00000175391 80 ntBASIC2,36□□□□□ -2,03
Trim41Q5NCC3 Mir7063-201ENSMUST00000184158 91 ntBASIC2,36□□□□□ -2,03
Trim41Q5NCC3 Gm44962-201ENSMUST00000206460 279 ntBASIC2,36□□□□□ -2,03
Trim41Q5NCC3 Gm24271-201ENSMUST00000102327 111 ntBASIC2,35□□□□□ -2,03
Trim41Q5NCC3 Gm26052-201ENSMUST00000104646 84 ntBASIC2,34□□□□□ -2,03
Trim41Q5NCC3 Gm23955-201ENSMUST00000157214 100 ntBASIC2,34□□□□□ -2,03
Trim41Q5NCC3 Traj60-201ENSMUST00000167781 54 ntBASIC2,34□□□□□ -2,03
Trim41Q5NCC3 Gm25222-201ENSMUST00000158199 126 ntBASIC2,32□□□□□ -2,04
Trim41Q5NCC3 Gm25296-201ENSMUST00000082566 67 ntBASIC2,32□□□□□ -2,04
Trim41Q5NCC3 Gm24808-201ENSMUST00000157993 118 ntBASIC2,31□□□□□ -2,04
Trim41Q5NCC3 Gm23994-201ENSMUST00000158059 88 ntBASIC2,3□□□□□ -2,04
Trim41Q5NCC3 Gm24321-201ENSMUST00000175348 80 ntBASIC2,3□□□□□ -2,04
Trim41Q5NCC3 Mir873a-201ENSMUST00000104863 77 ntBASIC2,29□□□□□ -2,04
Trim41Q5NCC3 Gm16399-201ENSMUST00000181423 219 ntBASIC2,29□□□□□ -2,04
Trim41Q5NCC3 Gm25138-201ENSMUST00000083248 136 ntBASIC2,29□□□□□ -2,04
Trim41Q5NCC3 Gm25307-201ENSMUST00000158885 106 ntBASIC2,27□□□□□ -2,05
Trim41Q5NCC3 Mir7010-201ENSMUST00000183464 63 ntBASIC2,27□□□□□ -2,05
Trim41Q5NCC3 Gm24895-201ENSMUST00000122742 74 ntBASIC2,25□□□□□ -2,05
Trim41Q5NCC3 Gm6607-201ENSMUST00000215035 328 ntBASIC2,25□□□□□ -2,05
Trim41Q5NCC3 Gm25894-201ENSMUST00000083458 75 ntBASIC2,25□□□□□ -2,05
Trim41Q5NCC3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC2,24□□□□□ -2,05
Trim41Q5NCC3 Gm25108-201ENSMUST00000122473 78 ntBASIC2,24□□□□□ -2,05
Trim41Q5NCC3 n-R5s157-201ENSMUST00000122543 121 ntBASIC2,24□□□□□ -2,05
Trim41Q5NCC3 Gm20386-201ENSMUST00000174010 132 ntBASIC2,24□□□□□ -2,05
Trim41Q5NCC3 Gm23017-201ENSMUST00000177583 72 ntBASIC2,24□□□□□ -2,05
Trim41Q5NCC3 Gm27263-201ENSMUST00000184760 76 ntBASIC2,24□□□□□ -2,05
Trim41Q5NCC3 Gm27587-201ENSMUST00000185116 163 ntBASIC2,23□□□□□ -2,05
Trim41Q5NCC3 Gm23573-201ENSMUST00000104408 107 ntBASIC2,22□□□□□ -2,05
Trim41Q5NCC3 Gm22542-201ENSMUST00000158166 95 ntBASIC2,22□□□□□ -2,05
Trim41Q5NCC3 Mir3070a-201ENSMUST00000175468 89 ntBASIC2,22□□□□□ -2,05
Trim41Q5NCC3 Gm25378-201ENSMUST00000104333 129 ntBASIC2,21□□□□□ -2,06
Trim41Q5NCC3 n-R5s6-201ENSMUST00000122663 88 ntBASIC2,21□□□□□ -2,06
Trim41Q5NCC3 Gm23278-201ENSMUST00000157911 143 ntBASIC2,21□□□□□ -2,06
Trim41Q5NCC3 Gm44327-201ENSMUST00000200068 117 ntBASIC2,19□□□□□ -2,06
Trim41Q5NCC3 Mir101a-201ENSMUST00000083517 83 ntBASIC2,19□□□□□ -2,06
Trim41Q5NCC3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC2,19□□□□□ -2,06
Trim41Q5NCC3 Gm24796-201ENSMUST00000104007 107 ntBASIC2,18□□□□□ -2,06
Trim41Q5NCC3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC2,18□□□□□ -2,06
Trim41Q5NCC3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC2,18□□□□□ -2,06
Trim41Q5NCC3 Gm22127-201ENSMUST00000083239 106 ntBASIC2,18□□□□□ -2,06
Trim41Q5NCC3 Mir211-201ENSMUST00000083651 106 ntBASIC2,18□□□□□ -2,06
Trim41Q5NCC3 AC125190.3-201ENSMUST00000223224 121 ntBASIC2,16□□□□□ -2,06
Trim41Q5NCC3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC2,16□□□□□ -2,06
Trim41Q5NCC3 Mir23a-201ENSMUST00000083677 75 ntBASIC2,15□□□□□ -2,07
Trim41Q5NCC3 Gm42845-201ENSMUST00000197766 105 ntBASIC2,14□□□□□ -2,07
Trim41Q5NCC3 Mir15a-201ENSMUST00000175266 84 ntBASIC2,13□□□□□ -2,07
Trim41Q5NCC3 Gm23494-201ENSMUST00000116830 126 ntBASIC2,12□□□□□ -2,07
Trim41Q5NCC3 Gm23893-201ENSMUST00000158106 134 ntBASIC2,12□□□□□ -2,07
Retrieved 100 of 76,532 protein–RNA pairs in 89,8 ms