Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm26104-201ENSMUST00000157250 108 ntBASIC-2.17□□□□□ -2.76
Upf3bQ3ULL6 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2.17□□□□□ -2.76
Upf3bQ3ULL6 Gm24449-201ENSMUST00000083985 106 ntBASIC-2.17□□□□□ -2.76
Upf3bQ3ULL6 Mir466h-201ENSMUST00000104748 81 ntBASIC-2.18□□□□□ -2.76
Upf3bQ3ULL6 Gm24384-201ENSMUST00000122693 75 ntBASIC-2.18□□□□□ -2.76
Upf3bQ3ULL6 AC132833.2-201ENSMUST00000228699 157 ntBASIC-2.18□□□□□ -2.76
Upf3bQ3ULL6 Gm24612-201ENSMUST00000083267 107 ntBASIC-2.18□□□□□ -2.76
Upf3bQ3ULL6 Gm24003-201ENSMUST00000158455 100 ntBASIC-2.19□□□□□ -2.76
Upf3bQ3ULL6 Gm22140-201ENSMUST00000158745 120 ntBASIC-2.19□□□□□ -2.76
Upf3bQ3ULL6 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
Upf3bQ3ULL6 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
Upf3bQ3ULL6 Gm23955-201ENSMUST00000157214 100 ntBASIC-2.2□□□□□ -2.76
Upf3bQ3ULL6 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.2□□□□□ -2.76
Upf3bQ3ULL6 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.2□□□□□ -2.76
Upf3bQ3ULL6 Snord47-201ENSMUST00000083034 77 ntBASIC-2.2□□□□□ -2.76
Upf3bQ3ULL6 Gm26109-201ENSMUST00000083970 70 ntBASIC-2.2□□□□□ -2.76
Upf3bQ3ULL6 Gm25425-201ENSMUST00000157611 96 ntBASIC-2.21□□□□□ -2.76
Upf3bQ3ULL6 Gm22349-201ENSMUST00000157864 107 ntBASIC-2.22□□□□□ -2.76
Upf3bQ3ULL6 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.22□□□□□ -2.76
Upf3bQ3ULL6 Mir1948-201ENSMUST00000157325 85 ntBASIC-2.23□□□□□ -2.77
Upf3bQ3ULL6 AC165138.1-201ENSMUST00000226984 270 ntBASIC-2.23□□□□□ -2.77
Upf3bQ3ULL6 Gm24134-201ENSMUST00000083361 71 ntBASIC-2.23□□□□□ -2.77
Upf3bQ3ULL6 Gm43749-201ENSMUST00000199345 352 ntBASIC-2.24□□□□□ -2.77
Upf3bQ3ULL6 Gm26124-201ENSMUST00000083359 108 ntBASIC-2.25□□□□□ -2.77
Upf3bQ3ULL6 Gm24801-201ENSMUST00000178503 105 ntBASIC-2.26□□□□□ -2.77
Upf3bQ3ULL6 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.26□□□□□ -2.77
Upf3bQ3ULL6 Gm24201-201ENSMUST00000082946 125 ntBASIC-2.27□□□□□ -2.77
Upf3bQ3ULL6 Gm22258-201ENSMUST00000177645 94 ntBASIC-2.28□□□□□ -2.77
Upf3bQ3ULL6 Gm26032-201ENSMUST00000178535 94 ntBASIC-2.28□□□□□ -2.77
Upf3bQ3ULL6 Gm25210-201ENSMUST00000178813 94 ntBASIC-2.28□□□□□ -2.77
Upf3bQ3ULL6 Gm25157-201ENSMUST00000178914 94 ntBASIC-2.28□□□□□ -2.77
Upf3bQ3ULL6 Gm22046-201ENSMUST00000179027 94 ntBASIC-2.28□□□□□ -2.77
Upf3bQ3ULL6 Gm22941-201ENSMUST00000179630 94 ntBASIC-2.28□□□□□ -2.77
Upf3bQ3ULL6 Gm25471-201ENSMUST00000180126 94 ntBASIC-2.28□□□□□ -2.77
Upf3bQ3ULL6 Gm24263-201ENSMUST00000104059 107 ntBASIC-2.29□□□□□ -2.78
Upf3bQ3ULL6 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.29□□□□□ -2.78
Upf3bQ3ULL6 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.29□□□□□ -2.78
Upf3bQ3ULL6 Gm37746-201ENSMUST00000193249 198 ntBASIC-2.29□□□□□ -2.78
Upf3bQ3ULL6 Gm23970-201ENSMUST00000083319 107 ntBASIC-2.3□□□□□ -2.78
Upf3bQ3ULL6 Mir7-1-201ENSMUST00000083500 108 ntBASIC-2.3□□□□□ -2.78
Upf3bQ3ULL6 Gm23240-201ENSMUST00000083009 121 ntBASIC-2.31□□□□□ -2.78
Upf3bQ3ULL6 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.32□□□□□ -2.78
Upf3bQ3ULL6 Gm38298-201ENSMUST00000193578 118 ntBASIC-2.32□□□□□ -2.78
Upf3bQ3ULL6 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.33□□□□□ -2.78
Upf3bQ3ULL6 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-2.34□□□□□ -2.78
Upf3bQ3ULL6 Gm14837-201ENSMUST00000119688 206 ntBASIC-2.34□□□□□ -2.78
Upf3bQ3ULL6 Gm20108-201ENSMUST00000219977 153 ntBASIC-2.34□□□□□ -2.78
Upf3bQ3ULL6 Gm22973-201ENSMUST00000083298 191 ntBASIC-2.34□□□□□ -2.78
Upf3bQ3ULL6 Gm23909-201ENSMUST00000104598 131 ntBASIC-2.35□□□□□ -2.79
Upf3bQ3ULL6 Gm25493-201ENSMUST00000157375 103 ntBASIC-2.35□□□□□ -2.79
Upf3bQ3ULL6 Gm24750-201ENSMUST00000157843 104 ntBASIC-2.35□□□□□ -2.79
Upf3bQ3ULL6 Gm27798-201ENSMUST00000184989 71 ntBASIC-2.36□□□□□ -2.79
Upf3bQ3ULL6 Gm27686-201ENSMUST00000185123 91 ntBASIC-2.36□□□□□ -2.79
Upf3bQ3ULL6 Gm22672-201ENSMUST00000104414 134 ntBASIC-2.37□□□□□ -2.79
Upf3bQ3ULL6 Gm25619-201ENSMUST00000122621 104 ntBASIC-2.37□□□□□ -2.79
Upf3bQ3ULL6 Mir494-201ENSMUST00000093632 85 ntBASIC-2.38□□□□□ -2.79
Upf3bQ3ULL6 Mir741-201ENSMUST00000103931 71 ntBASIC-2.39□□□□□ -2.79
Upf3bQ3ULL6 Gm25417-201ENSMUST00000104212 131 ntBASIC-2.39□□□□□ -2.79
Upf3bQ3ULL6 Gm25565-201ENSMUST00000104605 105 ntBASIC-2.39□□□□□ -2.79
Upf3bQ3ULL6 Gm23864-201ENSMUST00000177607 107 ntBASIC-2.39□□□□□ -2.79
Upf3bQ3ULL6 Gm25158-201ENSMUST00000177681 121 ntBASIC-2.39□□□□□ -2.79
Upf3bQ3ULL6 Gm26229-201ENSMUST00000179699 121 ntBASIC-2.39□□□□□ -2.79
Upf3bQ3ULL6 AC166341.8-201ENSMUST00000221267 108 ntBASIC-2.39□□□□□ -2.79
Upf3bQ3ULL6 mt-Tt-201ENSMUST00000082422 67 ntBASIC-2.39□□□□□ -2.79
Upf3bQ3ULL6 Gm24183-201ENSMUST00000122572 93 ntBASIC-2.4□□□□□ -2.79
Upf3bQ3ULL6 Gm23173-201ENSMUST00000157161 160 ntBASIC-2.4□□□□□ -2.79
Upf3bQ3ULL6 Gm25440-201ENSMUST00000158279 154 ntBASIC-2.4□□□□□ -2.79
Upf3bQ3ULL6 Gm24775-201ENSMUST00000157377 99 ntBASIC-2.42□□□□□ -2.8
Upf3bQ3ULL6 Gm25229-201ENSMUST00000178587 79 ntBASIC-2.42□□□□□ -2.8
Upf3bQ3ULL6 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.43□□□□□ -2.8
Upf3bQ3ULL6 Mir5117-201ENSMUST00000083226 84 ntBASIC-2.43□□□□□ -2.8
Upf3bQ3ULL6 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-2.44□□□□□ -2.8
Upf3bQ3ULL6 Gm44470-201ENSMUST00000203913 142 ntBASIC-2.44□□□□□ -2.8
Upf3bQ3ULL6 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-2.44□□□□□ -2.8
Upf3bQ3ULL6 Gm42844-201ENSMUST00000200355 112 ntBASIC-2.46□□□□□ -2.8
Upf3bQ3ULL6 AC122327.1-201ENSMUST00000220778 108 ntBASIC-2.46□□□□□ -2.8
Upf3bQ3ULL6 Gm23651-201ENSMUST00000116755 120 ntBASIC-2.47□□□□□ -2.8
Upf3bQ3ULL6 Gm22828-201ENSMUST00000083768 107 ntBASIC-2.47□□□□□ -2.8
Upf3bQ3ULL6 Gm25641-201ENSMUST00000175135 108 ntBASIC-2.48□□□□□ -2.81
Upf3bQ3ULL6 Gm22197-201ENSMUST00000116866 58 ntBASIC-2.49□□□□□ -2.81
Upf3bQ3ULL6 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-2.49□□□□□ -2.81
Upf3bQ3ULL6 Gm22205-201ENSMUST00000122655 71 ntBASIC-2.51□□□□□ -2.81
Upf3bQ3ULL6 Mir1969-201ENSMUST00000157623 94 ntBASIC-2.51□□□□□ -2.81
Upf3bQ3ULL6 Gm28724-201ENSMUST00000186149 625 ntBASIC-2.51□□□□□ -2.81
Upf3bQ3ULL6 Mir122-201ENSMUST00000083468 66 ntBASIC-2.51□□□□□ -2.81
Upf3bQ3ULL6 Gm26337-201ENSMUST00000178000 79 ntBASIC-2.52□□□□□ -2.81
Upf3bQ3ULL6 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-2.53□□□□□ -2.81
Upf3bQ3ULL6 Mir669l-201ENSMUST00000103771 98 ntBASIC-2.53□□□□□ -2.81
Upf3bQ3ULL6 Gm25862-201ENSMUST00000158250 129 ntBASIC-2.53□□□□□ -2.81
Upf3bQ3ULL6 Mir5619-201ENSMUST00000176065 61 ntBASIC-2.53□□□□□ -2.81
Upf3bQ3ULL6 Gm22621-201ENSMUST00000179678 74 ntBASIC-2.53□□□□□ -2.81
Upf3bQ3ULL6 Gm26225-201ENSMUST00000082508 135 ntBASIC-2.54□□□□□ -2.82
Upf3bQ3ULL6 Gm25696-201ENSMUST00000082900 105 ntBASIC-2.55□□□□□ -2.82
Upf3bQ3ULL6 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.57□□□□□ -2.82
Upf3bQ3ULL6 Gm10351-201ENSMUST00000087694 125 ntBASIC-2.57□□□□□ -2.82
Upf3bQ3ULL6 Gm23922-201ENSMUST00000178792 79 ntBASIC-2.58□□□□□ -2.82
Upf3bQ3ULL6 Gm24657-201ENSMUST00000180085 79 ntBASIC-2.58□□□□□ -2.82
Upf3bQ3ULL6 Gm22996-201ENSMUST00000180236 79 ntBASIC-2.58□□□□□ -2.82
Upf3bQ3ULL6 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-2.59□□□□□ -2.82
Upf3bQ3ULL6 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.59□□□□□ -2.82
Retrieved 100 of 76,532 protein–RNA pairs in 238.5 ms