Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm26338-201ENSMUST00000102372 110 ntBASIC0.69□□□□□ -2.3
Col28a1Q2UY11 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.69□□□□□ -2.3
Col28a1Q2UY11 Gm25552-201ENSMUST00000158081 91 ntBASIC0.69□□□□□ -2.3
Col28a1Q2UY11 Gm25641-201ENSMUST00000175135 108 ntBASIC0.69□□□□□ -2.3
Col28a1Q2UY11 Mir3109-201ENSMUST00000175301 88 ntBASIC0.69□□□□□ -2.3
Col28a1Q2UY11 Gm27937-201ENSMUST00000183605 88 ntBASIC0.69□□□□□ -2.3
Col28a1Q2UY11 Snord32a-201ENSMUST00000083285 83 ntBASIC0.69□□□□□ -2.3
Col28a1Q2UY11 Gm20386-201ENSMUST00000174010 132 ntBASIC0.68□□□□□ -2.3
Col28a1Q2UY11 Gm27980-201ENSMUST00000184094 169 ntBASIC0.68□□□□□ -2.3
Col28a1Q2UY11 Mir7673-201ENSMUST00000184567 64 ntBASIC0.68□□□□□ -2.3
Col28a1Q2UY11 Mir494-201ENSMUST00000093632 85 ntBASIC0.68□□□□□ -2.3
Col28a1Q2UY11 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Col28a1Q2UY11 Gm27943-201ENSMUST00000184844 116 ntBASIC0.67□□□□□ -2.3
Col28a1Q2UY11 Gm44455-201ENSMUST00000200061 82 ntBASIC0.67□□□□□ -2.3
Col28a1Q2UY11 Gm27977-201ENSMUST00000185159 111 ntBASIC0.66□□□□□ -2.3
Col28a1Q2UY11 Gm44327-201ENSMUST00000200068 117 ntBASIC0.66□□□□□ -2.3
Col28a1Q2UY11 Mir200a-201ENSMUST00000083466 90 ntBASIC0.66□□□□□ -2.3
Col28a1Q2UY11 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.65□□□□□ -2.31
Col28a1Q2UY11 Mir695-201ENSMUST00000102261 109 ntBASIC0.65□□□□□ -2.31
Col28a1Q2UY11 Gm24678-201ENSMUST00000158756 104 ntBASIC0.65□□□□□ -2.31
Col28a1Q2UY11 Gm24445-201ENSMUST00000083981 107 ntBASIC0.65□□□□□ -2.31
Col28a1Q2UY11 Gm22340-201ENSMUST00000157717 114 ntBASIC0.64□□□□□ -2.31
Col28a1Q2UY11 Gm22459-201ENSMUST00000082577 108 ntBASIC0.64□□□□□ -2.31
Col28a1Q2UY11 Mir15b-201ENSMUST00000083646 64 ntBASIC0.63□□□□□ -2.31
Col28a1Q2UY11 Gm24555-201ENSMUST00000104548 124 ntBASIC0.62□□□□□ -2.31
Col28a1Q2UY11 Gm22720-201ENSMUST00000122710 87 ntBASIC0.62□□□□□ -2.31
Col28a1Q2UY11 Gm22087-201ENSMUST00000158339 88 ntBASIC0.62□□□□□ -2.31
Col28a1Q2UY11 Gm25307-201ENSMUST00000158885 106 ntBASIC0.62□□□□□ -2.31
Col28a1Q2UY11 Gm25993-201ENSMUST00000175391 80 ntBASIC0.62□□□□□ -2.31
Col28a1Q2UY11 Gm22303-201ENSMUST00000082686 122 ntBASIC0.62□□□□□ -2.31
Col28a1Q2UY11 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.62□□□□□ -2.31
Col28a1Q2UY11 Mir3071-201ENSMUST00000093621 80 ntBASIC0.62□□□□□ -2.31
Col28a1Q2UY11 Gm24396-201ENSMUST00000116905 93 ntBASIC0.61□□□□□ -2.31
Col28a1Q2UY11 Gm22542-201ENSMUST00000158166 95 ntBASIC0.61□□□□□ -2.31
Col28a1Q2UY11 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.61□□□□□ -2.31
Col28a1Q2UY11 Gm25247-201ENSMUST00000175475 90 ntBASIC0.61□□□□□ -2.31
Col28a1Q2UY11 Mir6364-201ENSMUST00000183396 86 ntBASIC0.61□□□□□ -2.31
Col28a1Q2UY11 Gm26257-201ENSMUST00000122500 107 ntBASIC0.6□□□□□ -2.31
Col28a1Q2UY11 Gm24226-201ENSMUST00000158826 97 ntBASIC0.6□□□□□ -2.31
Col28a1Q2UY11 Mir7229-201ENSMUST00000197062 53 ntBASIC0.6□□□□□ -2.31
Col28a1Q2UY11 Gm24258-201ENSMUST00000083739 133 ntBASIC0.6□□□□□ -2.31
Col28a1Q2UY11 Gm25378-201ENSMUST00000104333 129 ntBASIC0.59□□□□□ -2.31
Col28a1Q2UY11 Gm23605-201ENSMUST00000157255 127 ntBASIC0.59□□□□□ -2.31
Col28a1Q2UY11 Gm26285-201ENSMUST00000177923 107 ntBASIC0.59□□□□□ -2.31
Col28a1Q2UY11 Gm27289-201ENSMUST00000183341 82 ntBASIC0.59□□□□□ -2.31
Col28a1Q2UY11 Gm42845-201ENSMUST00000197766 105 ntBASIC0.59□□□□□ -2.31
Col28a1Q2UY11 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.59□□□□□ -2.31
Col28a1Q2UY11 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.59□□□□□ -2.31
Col28a1Q2UY11 Gm23622-201ENSMUST00000082460 107 ntBASIC0.59□□□□□ -2.31
Col28a1Q2UY11 Gm24278-201ENSMUST00000104239 127 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Gm24070-201ENSMUST00000104519 130 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Gm25440-201ENSMUST00000158279 154 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Gm24772-201ENSMUST00000158507 110 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Gm26007-201ENSMUST00000158798 120 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Mir3105-201ENSMUST00000175480 85 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Gm23649-201ENSMUST00000179007 107 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Snord33-201ENSMUST00000083694 84 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Mir362-201ENSMUST00000093592 65 ntBASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Col28a1Q2UY11 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.57□□□□□ -2.32
Col28a1Q2UY11 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.57□□□□□ -2.32
Col28a1Q2UY11 Gm25296-201ENSMUST00000082566 67 ntBASIC0.57□□□□□ -2.32
Col28a1Q2UY11 Gm25183-201ENSMUST00000157752 106 ntBASIC0.56□□□□□ -2.32
Col28a1Q2UY11 Mir216a-201ENSMUST00000083605 72 ntBASIC0.56□□□□□ -2.32
Col28a1Q2UY11 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Col28a1Q2UY11 Gm27450-201ENSMUST00000104632 90 ntBASIC0.55□□□□□ -2.32
Col28a1Q2UY11 Gm25010-201ENSMUST00000158403 65 ntBASIC0.55□□□□□ -2.32
Col28a1Q2UY11 Gm23020-201ENSMUST00000158766 253 ntBASIC0.55□□□□□ -2.32
Col28a1Q2UY11 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Col28a1Q2UY11 Gm25309-201ENSMUST00000116728 126 ntBASIC0.54□□□□□ -2.32
Col28a1Q2UY11 Gm23036-201ENSMUST00000157885 99 ntBASIC0.54□□□□□ -2.32
Col28a1Q2UY11 Gm23072-201ENSMUST00000158243 123 ntBASIC0.54□□□□□ -2.32
Col28a1Q2UY11 Gm44345-201ENSMUST00000199560 135 ntBASIC0.54□□□□□ -2.32
Col28a1Q2UY11 Gm22302-201ENSMUST00000082657 106 ntBASIC0.54□□□□□ -2.32
Col28a1Q2UY11 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.53□□□□□ -2.32
Col28a1Q2UY11 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.53□□□□□ -2.32
Col28a1Q2UY11 Gm24927-201ENSMUST00000083397 107 ntBASIC0.53□□□□□ -2.32
Col28a1Q2UY11 Gm26236-201ENSMUST00000175536 137 ntBASIC0.52□□□□□ -2.33
Col28a1Q2UY11 Gm25648-201ENSMUST00000177844 79 ntBASIC0.52□□□□□ -2.33
Col28a1Q2UY11 Gm44457-201ENSMUST00000198109 76 ntBASIC0.52□□□□□ -2.33
Col28a1Q2UY11 Gm45125-201ENSMUST00000206908 151 ntBASIC0.52□□□□□ -2.33
Col28a1Q2UY11 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.52□□□□□ -2.33
Col28a1Q2UY11 Gm24201-201ENSMUST00000082946 125 ntBASIC0.52□□□□□ -2.33
Col28a1Q2UY11 Gm25408-201ENSMUST00000104104 133 ntBASIC0.51□□□□□ -2.33
Col28a1Q2UY11 Gm22595-201ENSMUST00000104250 130 ntBASIC0.51□□□□□ -2.33
Col28a1Q2UY11 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
Col28a1Q2UY11 Gm24400-201ENSMUST00000157865 107 ntBASIC0.51□□□□□ -2.33
Col28a1Q2UY11 Gm22165-201ENSMUST00000158414 103 ntBASIC0.51□□□□□ -2.33
Col28a1Q2UY11 Mir717-201ENSMUST00000102259 109 ntBASIC0.5□□□□□ -2.33
Col28a1Q2UY11 Gm22717-201ENSMUST00000122703 171 ntBASIC0.5□□□□□ -2.33
Col28a1Q2UY11 Gm23590-201ENSMUST00000157661 104 ntBASIC0.5□□□□□ -2.33
Col28a1Q2UY11 Gm26484-201ENSMUST00000158018 106 ntBASIC0.5□□□□□ -2.33
Col28a1Q2UY11 Mir487b-201ENSMUST00000102265 82 ntBASIC0.49□□□□□ -2.33
Col28a1Q2UY11 Mir670-201ENSMUST00000102380 100 ntBASIC0.49□□□□□ -2.33
Col28a1Q2UY11 Gm24796-201ENSMUST00000104007 107 ntBASIC0.49□□□□□ -2.33
Col28a1Q2UY11 Gm22078-201ENSMUST00000157593 103 ntBASIC0.49□□□□□ -2.33
Col28a1Q2UY11 Gm24884-201ENSMUST00000158784 119 ntBASIC0.49□□□□□ -2.33
Col28a1Q2UY11 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms