Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Mir196a-2-201ENSMUST00000083554 85 ntBASIC1,44□□□□□ -2,18
Col17a1Q07563 Gm24258-201ENSMUST00000083739 133 ntBASIC1,44□□□□□ -2,18
Col17a1Q07563 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1,44□□□□□ -2,18
Col17a1Q07563 Gm22541-201ENSMUST00000158165 127 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Gm22663-201ENSMUST00000158721 102 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Gm26007-201ENSMUST00000158798 120 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Gm26491-201ENSMUST00000179268 121 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Gm27974-201ENSMUST00000183415 105 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Mir3071-201ENSMUST00000093621 80 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Mir709-201ENSMUST00000102190 88 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Mir1904-201ENSMUST00000122702 80 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Gm25222-201ENSMUST00000158199 126 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Gm24229-201ENSMUST00000158830 118 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Gm25802-201ENSMUST00000082639 77 ntBASIC1,43□□□□□ -2,18
Col17a1Q07563 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,42□□□□□ -2,18
Col17a1Q07563 Gm24710-201ENSMUST00000175235 101 ntBASIC1,42□□□□□ -2,18
Col17a1Q07563 Gm24135-201ENSMUST00000179085 101 ntBASIC1,42□□□□□ -2,18
Col17a1Q07563 Gm23245-201ENSMUST00000083370 135 ntBASIC1,42□□□□□ -2,18
Col17a1Q07563 Gm25663-201ENSMUST00000157698 135 ntBASIC1,41□□□□□ -2,18
Col17a1Q07563 Gm24400-201ENSMUST00000157865 107 ntBASIC1,41□□□□□ -2,18
Col17a1Q07563 Mir7675-201ENSMUST00000184262 58 ntBASIC1,41□□□□□ -2,18
Col17a1Q07563 Gm26052-201ENSMUST00000104646 84 ntBASIC1,4□□□□□ -2,19
Col17a1Q07563 Gm26038-201ENSMUST00000158151 106 ntBASIC1,4□□□□□ -2,19
Col17a1Q07563 Mir6342-201ENSMUST00000183870 125 ntBASIC1,4□□□□□ -2,19
Col17a1Q07563 Gm27587-201ENSMUST00000185116 163 ntBASIC1,4□□□□□ -2,19
Col17a1Q07563 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1,4□□□□□ -2,19
Col17a1Q07563 Snord95-201ENSMUST00000082846 68 ntBASIC1,4□□□□□ -2,19
Col17a1Q07563 Mir324-201ENSMUST00000083600 89 ntBASIC1,4□□□□□ -2,19
Col17a1Q07563 Gm23012-201ENSMUST00000104149 83 ntBASIC1,39□□□□□ -2,19
Col17a1Q07563 Gm25108-201ENSMUST00000122473 78 ntBASIC1,39□□□□□ -2,19
Col17a1Q07563 Gm23590-201ENSMUST00000157661 104 ntBASIC1,39□□□□□ -2,19
Col17a1Q07563 Gm22016-201ENSMUST00000158793 114 ntBASIC1,39□□□□□ -2,19
Col17a1Q07563 Gm42677-201ENSMUST00000196363 127 ntBASIC1,39□□□□□ -2,19
Col17a1Q07563 AC147560.1-201ENSMUST00000197528 107 ntBASIC1,39□□□□□ -2,19
Col17a1Q07563 Gm26438-201ENSMUST00000082593 107 ntBASIC1,39□□□□□ -2,19
Col17a1Q07563 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1,39□□□□□ -2,19
Col17a1Q07563 Mir1961-201ENSMUST00000158643 112 ntBASIC1,38□□□□□ -2,19
Col17a1Q07563 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1,38□□□□□ -2,19
Col17a1Q07563 CT025630.1-201ENSMUST00000227901 172 ntBASIC1,38□□□□□ -2,19
Col17a1Q07563 Gm22127-201ENSMUST00000083239 106 ntBASIC1,38□□□□□ -2,19
Col17a1Q07563 Gm23955-201ENSMUST00000157214 100 ntBASIC1,37□□□□□ -2,19
Col17a1Q07563 Gm23605-201ENSMUST00000157255 127 ntBASIC1,37□□□□□ -2,19
Col17a1Q07563 Gm24070-201ENSMUST00000104519 130 ntBASIC1,37□□□□□ -2,19
Col17a1Q07563 Mir1933-201ENSMUST00000158930 88 ntBASIC1,37□□□□□ -2,19
Col17a1Q07563 Mir653-201ENSMUST00000102402 85 ntBASIC1,36□□□□□ -2,19
Col17a1Q07563 Gm25309-201ENSMUST00000116728 126 ntBASIC1,36□□□□□ -2,19
Col17a1Q07563 Mir100-201ENSMUST00000175270 80 ntBASIC1,36□□□□□ -2,19
Col17a1Q07563 Mir6380-201ENSMUST00000184334 81 ntBASIC1,36□□□□□ -2,19
Col17a1Q07563 Gm22746-201ENSMUST00000082494 107 ntBASIC1,36□□□□□ -2,19
Col17a1Q07563 Gm25040-201ENSMUST00000103877 66 ntBASIC1,35□□□□□ -2,19
Col17a1Q07563 Gm23036-201ENSMUST00000157885 99 ntBASIC1,35□□□□□ -2,19
Col17a1Q07563 Mir377-201ENSMUST00000083504 68 ntBASIC1,35□□□□□ -2,19
Col17a1Q07563 Gm14533-201ENSMUST00000117088 93 ntBASIC1,34□□□□□ -2,19
Col17a1Q07563 Gm24549-201ENSMUST00000158647 139 ntBASIC1,34□□□□□ -2,19
Col17a1Q07563 Gm22466-201ENSMUST00000175278 69 ntBASIC1,34□□□□□ -2,19
Col17a1Q07563 Gm38274-201ENSMUST00000195689 148 ntBASIC1,34□□□□□ -2,19
Col17a1Q07563 Gm22785-201ENSMUST00000104087 132 ntBASIC1,33□□□□□ -2,2
Col17a1Q07563 Gm44396-201ENSMUST00000199843 114 ntBASIC1,33□□□□□ -2,2
Col17a1Q07563 Gm45688-201ENSMUST00000210002 101 ntBASIC1,33□□□□□ -2,2
Col17a1Q07563 Gm6607-201ENSMUST00000215035 328 ntBASIC1,33□□□□□ -2,2
Col17a1Q07563 AC113441.1-201ENSMUST00000223464 134 ntBASIC1,33□□□□□ -2,2
Col17a1Q07563 Gm22652-201ENSMUST00000083207 131 ntBASIC1,33□□□□□ -2,2
Col17a1Q07563 Gm25326-201ENSMUST00000101903 107 ntBASIC1,32□□□□□ -2,2
Col17a1Q07563 Gm22165-201ENSMUST00000158414 103 ntBASIC1,32□□□□□ -2,2
Col17a1Q07563 Mir30a-201ENSMUST00000083471 71 ntBASIC1,32□□□□□ -2,2
Col17a1Q07563 Mir717-201ENSMUST00000102259 109 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Snord69-201ENSMUST00000104024 80 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Gm23130-201ENSMUST00000104252 74 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Gm26274-201ENSMUST00000157103 321 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Gm23339-201ENSMUST00000158962 139 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Gm25936-201ENSMUST00000179952 114 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Mir1949-202ENSMUST00000199259 70 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Gm45125-201ENSMUST00000206908 151 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Gm23573-201ENSMUST00000104408 107 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Gm25055-201ENSMUST00000157369 76 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Snord57-201ENSMUST00000083338 72 ntBASIC1,31□□□□□ -2,2
Col17a1Q07563 Gm22164-201ENSMUST00000158413 106 ntBASIC1,3□□□□□ -2,2
Col17a1Q07563 Gm27717-201ENSMUST00000183933 151 ntBASIC1,3□□□□□ -2,2
Col17a1Q07563 Gm13065-201ENSMUST00000119178 141 ntBASIC1,29□□□□□ -2,2
Col17a1Q07563 Mir7077-201ENSMUST00000183991 57 ntBASIC1,29□□□□□ -2,2
Col17a1Q07563 Gm24233-201ENSMUST00000104317 122 ntBASIC1,28□□□□□ -2,2
Col17a1Q07563 Gm25656-201ENSMUST00000158466 66 ntBASIC1,28□□□□□ -2,2
Col17a1Q07563 Mir7091-201ENSMUST00000184075 79 ntBASIC1,28□□□□□ -2,2
Col17a1Q07563 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1,27□□□□□ -2,21
Col17a1Q07563 Mir6896-201ENSMUST00000198033 73 ntBASIC1,27□□□□□ -2,21
Col17a1Q07563 Gm22298-201ENSMUST00000082662 133 ntBASIC1,27□□□□□ -2,21
Col17a1Q07563 Gm23749-201ENSMUST00000104223 131 ntBASIC1,26□□□□□ -2,21
Col17a1Q07563 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,25□□□□□ -2,21
Col17a1Q07563 Gm27420-201ENSMUST00000183823 79 ntBASIC1,25□□□□□ -2,21
Col17a1Q07563 Gm26338-201ENSMUST00000102372 110 ntBASIC1,24□□□□□ -2,21
Col17a1Q07563 Gm6272-201ENSMUST00000121256 171 ntBASIC1,24□□□□□ -2,21
Col17a1Q07563 Gm25968-201ENSMUST00000157167 100 ntBASIC1,24□□□□□ -2,21
Col17a1Q07563 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1,24□□□□□ -2,21
Col17a1Q07563 Mir500-201ENSMUST00000093600 92 ntBASIC1,24□□□□□ -2,21
Col17a1Q07563 Gm23787-201ENSMUST00000122538 73 ntBASIC1,24□□□□□ -2,21
Col17a1Q07563 Gm27263-201ENSMUST00000184760 76 ntBASIC1,24□□□□□ -2,21
Col17a1Q07563 Gm23483-201ENSMUST00000104179 108 ntBASIC1,23□□□□□ -2,21
Col17a1Q07563 Gm22720-201ENSMUST00000122710 87 ntBASIC1,23□□□□□ -2,21
Col17a1Q07563 AC129019.2-201ENSMUST00000222063 202 ntBASIC1,23□□□□□ -2,21
Retrieved 100 of 76,532 protein–RNA pairs in 114,5 ms