Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm27980-201ENSMUST00000184094 169 ntBASIC0.8□□□□□ -2.28
Ushbp1Q8R370 Gm27975-201ENSMUST00000184400 101 ntBASIC0.79□□□□□ -2.28
Ushbp1Q8R370 Gm44455-201ENSMUST00000200061 82 ntBASIC0.79□□□□□ -2.28
Ushbp1Q8R370 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.79□□□□□ -2.28
Ushbp1Q8R370 Gm25696-201ENSMUST00000082900 105 ntBASIC0.79□□□□□ -2.28
Ushbp1Q8R370 Gm25681-201ENSMUST00000083938 106 ntBASIC0.79□□□□□ -2.28
Ushbp1Q8R370 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Ushbp1Q8R370 Gm22406-201ENSMUST00000174923 93 ntBASIC0.78□□□□□ -2.28
Ushbp1Q8R370 Gm22827-201ENSMUST00000083766 107 ntBASIC0.78□□□□□ -2.28
Ushbp1Q8R370 Gm24983-201ENSMUST00000104457 69 ntBASIC0.77□□□□□ -2.29
Ushbp1Q8R370 Gm26051-201ENSMUST00000104642 93 ntBASIC0.77□□□□□ -2.29
Ushbp1Q8R370 Gm23278-201ENSMUST00000157911 143 ntBASIC0.77□□□□□ -2.29
Ushbp1Q8R370 Gm27289-201ENSMUST00000183341 82 ntBASIC0.77□□□□□ -2.29
Ushbp1Q8R370 Mir141-201ENSMUST00000083540 72 ntBASIC0.77□□□□□ -2.29
Ushbp1Q8R370 Mir216a-201ENSMUST00000083605 72 ntBASIC0.77□□□□□ -2.29
Ushbp1Q8R370 Gm23012-201ENSMUST00000104149 83 ntBASIC0.76□□□□□ -2.29
Ushbp1Q8R370 Gm22679-201ENSMUST00000116975 100 ntBASIC0.76□□□□□ -2.29
Ushbp1Q8R370 Gm25622-201ENSMUST00000157217 104 ntBASIC0.76□□□□□ -2.29
Ushbp1Q8R370 Gm22203-201ENSMUST00000158605 58 ntBASIC0.76□□□□□ -2.29
Ushbp1Q8R370 Gm23531-201ENSMUST00000104567 68 ntBASIC0.75□□□□□ -2.29
Ushbp1Q8R370 Gm27943-201ENSMUST00000184844 116 ntBASIC0.75□□□□□ -2.29
Ushbp1Q8R370 Mir200a-201ENSMUST00000083466 90 ntBASIC0.75□□□□□ -2.29
Ushbp1Q8R370 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.74□□□□□ -2.29
Ushbp1Q8R370 Gm24258-201ENSMUST00000083739 133 ntBASIC0.74□□□□□ -2.29
Ushbp1Q8R370 Gm22048-201ENSMUST00000104721 89 ntBASIC0.73□□□□□ -2.29
Ushbp1Q8R370 Gm22522-201ENSMUST00000158271 151 ntBASIC0.73□□□□□ -2.29
Ushbp1Q8R370 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.73□□□□□ -2.29
Ushbp1Q8R370 Mir1197-201ENSMUST00000117037 120 ntBASIC0.72□□□□□ -2.29
Ushbp1Q8R370 Gm23605-201ENSMUST00000157255 127 ntBASIC0.72□□□□□ -2.29
Ushbp1Q8R370 Gm22088-201ENSMUST00000158341 117 ntBASIC0.72□□□□□ -2.29
Ushbp1Q8R370 Gm26207-201ENSMUST00000082909 104 ntBASIC0.72□□□□□ -2.29
Ushbp1Q8R370 Gm24162-201ENSMUST00000093665 102 ntBASIC0.72□□□□□ -2.29
Ushbp1Q8R370 Gm22458-201ENSMUST00000082576 107 ntBASIC0.71□□□□□ -2.3
Ushbp1Q8R370 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.71□□□□□ -2.3
Ushbp1Q8R370 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.71□□□□□ -2.3
Ushbp1Q8R370 Gm23020-201ENSMUST00000158766 253 ntBASIC0.7□□□□□ -2.3
Ushbp1Q8R370 Mir7229-201ENSMUST00000197062 53 ntBASIC0.7□□□□□ -2.3
Ushbp1Q8R370 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.7□□□□□ -2.3
Ushbp1Q8R370 Snord95-201ENSMUST00000082846 68 ntBASIC0.7□□□□□ -2.3
Ushbp1Q8R370 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.7□□□□□ -2.3
Ushbp1Q8R370 Gm43038-201ENSMUST00000202359 88 ntBASIC0.69□□□□□ -2.3
Ushbp1Q8R370 Gm25061-201ENSMUST00000104665 107 ntBASIC0.68□□□□□ -2.3
Ushbp1Q8R370 Gm25322-201ENSMUST00000122556 104 ntBASIC0.68□□□□□ -2.3
Ushbp1Q8R370 Gm24381-201ENSMUST00000122697 104 ntBASIC0.68□□□□□ -2.3
Ushbp1Q8R370 Gm25160-201ENSMUST00000158914 102 ntBASIC0.68□□□□□ -2.3
Ushbp1Q8R370 Snora26-201ENSMUST00000175614 121 ntBASIC0.68□□□□□ -2.3
Ushbp1Q8R370 Mir6904-201ENSMUST00000183443 67 ntBASIC0.68□□□□□ -2.3
Ushbp1Q8R370 Gm23788-201ENSMUST00000122535 106 ntBASIC0.67□□□□□ -2.3
Ushbp1Q8R370 Gm25328-201ENSMUST00000175013 107 ntBASIC0.67□□□□□ -2.3
Ushbp1Q8R370 Gm25870-201ENSMUST00000179845 79 ntBASIC0.67□□□□□ -2.3
Ushbp1Q8R370 Gm44327-201ENSMUST00000200068 117 ntBASIC0.67□□□□□ -2.3
Ushbp1Q8R370 Gm25644-201ENSMUST00000083209 107 ntBASIC0.67□□□□□ -2.3
Ushbp1Q8R370 Gm25991-201ENSMUST00000102439 99 ntBASIC0.66□□□□□ -2.3
Ushbp1Q8R370 Gm23500-201ENSMUST00000157735 98 ntBASIC0.66□□□□□ -2.3
Ushbp1Q8R370 Gm25885-201ENSMUST00000157779 109 ntBASIC0.66□□□□□ -2.3
Ushbp1Q8R370 Gm26484-201ENSMUST00000158018 106 ntBASIC0.66□□□□□ -2.3
Ushbp1Q8R370 Gm22303-201ENSMUST00000082686 122 ntBASIC0.66□□□□□ -2.3
Ushbp1Q8R370 Mir3105-201ENSMUST00000175480 85 ntBASIC0.65□□□□□ -2.31
Ushbp1Q8R370 Gm26236-201ENSMUST00000175536 137 ntBASIC0.65□□□□□ -2.31
Ushbp1Q8R370 Gm24278-201ENSMUST00000104239 127 ntBASIC0.64□□□□□ -2.31
Ushbp1Q8R370 Gm24963-201ENSMUST00000157916 144 ntBASIC0.64□□□□□ -2.31
Ushbp1Q8R370 Gm44457-201ENSMUST00000198109 76 ntBASIC0.64□□□□□ -2.31
Ushbp1Q8R370 Gm26438-201ENSMUST00000082593 107 ntBASIC0.64□□□□□ -2.31
Ushbp1Q8R370 Gm25542-201ENSMUST00000116889 94 ntBASIC0.63□□□□□ -2.31
Ushbp1Q8R370 Mir669h-201ENSMUST00000116944 125 ntBASIC0.63□□□□□ -2.31
Ushbp1Q8R370 Gm42845-201ENSMUST00000197766 105 ntBASIC0.63□□□□□ -2.31
Ushbp1Q8R370 Mir7077-201ENSMUST00000183991 57 ntBASIC0.62□□□□□ -2.31
Ushbp1Q8R370 Mir6896-201ENSMUST00000198033 73 ntBASIC0.62□□□□□ -2.31
Ushbp1Q8R370 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Ushbp1Q8R370 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Ushbp1Q8R370 Gm24868-201ENSMUST00000157265 136 ntBASIC0.61□□□□□ -2.31
Ushbp1Q8R370 Gm24077-201ENSMUST00000158183 136 ntBASIC0.61□□□□□ -2.31
Ushbp1Q8R370 Gm25854-201ENSMUST00000082792 72 ntBASIC0.61□□□□□ -2.31
Ushbp1Q8R370 Gm23715-201ENSMUST00000157354 106 ntBASIC0.6□□□□□ -2.31
Ushbp1Q8R370 Gm25055-201ENSMUST00000157369 76 ntBASIC0.6□□□□□ -2.31
Ushbp1Q8R370 Gm29432-201ENSMUST00000185397 139 ntBASIC0.6□□□□□ -2.31
Ushbp1Q8R370 Gm25656-201ENSMUST00000158466 66 ntBASIC0.59□□□□□ -2.31
Ushbp1Q8R370 Gm24674-201ENSMUST00000179194 104 ntBASIC0.59□□□□□ -2.31
Ushbp1Q8R370 Gm22302-201ENSMUST00000082657 106 ntBASIC0.59□□□□□ -2.31
Ushbp1Q8R370 Gm24580-201ENSMUST00000103965 131 ntBASIC0.58□□□□□ -2.32
Ushbp1Q8R370 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.58□□□□□ -2.32
Ushbp1Q8R370 Mir3108-201ENSMUST00000175500 79 ntBASIC0.58□□□□□ -2.32
Ushbp1Q8R370 Gm25756-201ENSMUST00000103990 136 ntBASIC0.57□□□□□ -2.32
Ushbp1Q8R370 Gm25619-201ENSMUST00000122621 104 ntBASIC0.57□□□□□ -2.32
Ushbp1Q8R370 Gm26359-201ENSMUST00000158873 101 ntBASIC0.57□□□□□ -2.32
Ushbp1Q8R370 Gm25740-201ENSMUST00000180247 107 ntBASIC0.57□□□□□ -2.32
Ushbp1Q8R370 Gm45541-201ENSMUST00000210443 54 ntBASIC0.57□□□□□ -2.32
Ushbp1Q8R370 Gm24793-201ENSMUST00000104289 132 ntBASIC0.56□□□□□ -2.32
Ushbp1Q8R370 Gm24199-201ENSMUST00000157808 136 ntBASIC0.56□□□□□ -2.32
Ushbp1Q8R370 Gm25798-201ENSMUST00000082641 107 ntBASIC0.56□□□□□ -2.32
Ushbp1Q8R370 Gm14533-201ENSMUST00000117088 93 ntBASIC0.55□□□□□ -2.32
Ushbp1Q8R370 Gm14947-201ENSMUST00000133704 303 ntBASIC0.55□□□□□ -2.32
Ushbp1Q8R370 Gm25964-201ENSMUST00000157171 97 ntBASIC0.55□□□□□ -2.32
Ushbp1Q8R370 Gm22239-201ENSMUST00000175220 103 ntBASIC0.55□□□□□ -2.32
Ushbp1Q8R370 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.55□□□□□ -2.32
Ushbp1Q8R370 Gm23672-201ENSMUST00000157471 107 ntBASIC0.54□□□□□ -2.32
Ushbp1Q8R370 Mir1950-201ENSMUST00000158526 74 ntBASIC0.54□□□□□ -2.32
Ushbp1Q8R370 Mir224-201ENSMUST00000083608 82 ntBASIC0.54□□□□□ -2.32
Ushbp1Q8R370 Gm25408-201ENSMUST00000104104 133 ntBASIC0.53□□□□□ -2.32
Ushbp1Q8R370 Gm25417-201ENSMUST00000104212 131 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 137.6 ms