Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 AC157278.1-201ENSMUST00000221621 148 ntBASIC1,65□□□□□ -2,15
Ddx54Q8K4L0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,64□□□□□ -2,15
Ddx54Q8K4L0 Gm23783-201ENSMUST00000157941 102 ntBASIC1,64□□□□□ -2,15
Ddx54Q8K4L0 Gm24808-201ENSMUST00000157993 118 ntBASIC1,64□□□□□ -2,15
Ddx54Q8K4L0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1,64□□□□□ -2,15
Ddx54Q8K4L0 Mir1949-202ENSMUST00000199259 70 ntBASIC1,64□□□□□ -2,15
Ddx54Q8K4L0 Gm43885-201ENSMUST00000204928 2542 ntBASIC1,63□□□□□ -2,15
Ddx54Q8K4L0 Gm23221-201ENSMUST00000158118 93 ntBASIC1,63□□□□□ -2,15
Ddx54Q8K4L0 Gm24165-201ENSMUST00000082718 128 ntBASIC1,63□□□□□ -2,15
Ddx54Q8K4L0 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,63□□□□□ -2,15
Ddx54Q8K4L0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,63□□□□□ -2,15
Ddx54Q8K4L0 Gm16399-201ENSMUST00000181423 219 ntBASIC1,62□□□□□ -2,15
Ddx54Q8K4L0 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1,62□□□□□ -2,15
Ddx54Q8K4L0 Gm5581-201ENSMUST00000072940 2550 ntBASIC1,61□□□□□ -2,15
Ddx54Q8K4L0 Gm23012-201ENSMUST00000104149 83 ntBASIC1,61□□□□□ -2,15
Ddx54Q8K4L0 Gm24445-201ENSMUST00000083981 107 ntBASIC1,61□□□□□ -2,15
Ddx54Q8K4L0 Gm23708-201ENSMUST00000104367 123 ntBASIC1,6□□□□□ -2,15
Ddx54Q8K4L0 Gm44962-201ENSMUST00000206460 279 ntBASIC1,6□□□□□ -2,15
Ddx54Q8K4L0 Gm13065-201ENSMUST00000119178 141 ntBASIC1,59□□□□□ -2,15
Ddx54Q8K4L0 Gm22603-201ENSMUST00000157603 96 ntBASIC1,59□□□□□ -2,15
Ddx54Q8K4L0 Gm25183-201ENSMUST00000157752 106 ntBASIC1,59□□□□□ -2,15
Ddx54Q8K4L0 Gm25166-201ENSMUST00000158909 111 ntBASIC1,59□□□□□ -2,15
Ddx54Q8K4L0 Gm23649-201ENSMUST00000179007 107 ntBASIC1,59□□□□□ -2,15
Ddx54Q8K4L0 Mir15b-201ENSMUST00000083646 64 ntBASIC1,59□□□□□ -2,15
Ddx54Q8K4L0 Gm24701-201ENSMUST00000101946 105 ntBASIC1,58□□□□□ -2,16
Ddx54Q8K4L0 Gm24271-201ENSMUST00000102327 111 ntBASIC1,58□□□□□ -2,16
Ddx54Q8K4L0 Gm24895-201ENSMUST00000122742 74 ntBASIC1,58□□□□□ -2,16
Ddx54Q8K4L0 Gm27554-201ENSMUST00000185074 98 ntBASIC1,58□□□□□ -2,16
Ddx54Q8K4L0 Gm26438-201ENSMUST00000082593 107 ntBASIC1,58□□□□□ -2,16
Ddx54Q8K4L0 Gm22652-201ENSMUST00000083207 131 ntBASIC1,58□□□□□ -2,16
Ddx54Q8K4L0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1,57□□□□□ -2,16
Ddx54Q8K4L0 Gm27717-201ENSMUST00000183933 151 ntBASIC1,57□□□□□ -2,16
Ddx54Q8K4L0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,57□□□□□ -2,16
Ddx54Q8K4L0 Gm24233-201ENSMUST00000104317 122 ntBASIC1,56□□□□□ -2,16
Ddx54Q8K4L0 Gm23989-201ENSMUST00000117030 66 ntBASIC1,56□□□□□ -2,16
Ddx54Q8K4L0 Mir3079-201ENSMUST00000175428 90 ntBASIC1,56□□□□□ -2,16
Ddx54Q8K4L0 Mir7673-201ENSMUST00000184567 64 ntBASIC1,56□□□□□ -2,16
Ddx54Q8K4L0 Snord95-201ENSMUST00000082846 68 ntBASIC1,56□□□□□ -2,16
Ddx54Q8K4L0 Mir876-201ENSMUST00000104659 81 ntBASIC1,55□□□□□ -2,16
Ddx54Q8K4L0 Gm22520-201ENSMUST00000158269 129 ntBASIC1,55□□□□□ -2,16
Ddx54Q8K4L0 Gm27937-201ENSMUST00000183605 88 ntBASIC1,55□□□□□ -2,16
Ddx54Q8K4L0 Gm27977-201ENSMUST00000185159 111 ntBASIC1,55□□□□□ -2,16
Ddx54Q8K4L0 Gm25652-201ENSMUST00000083780 103 ntBASIC1,55□□□□□ -2,16
Ddx54Q8K4L0 Mir669h-201ENSMUST00000116944 125 ntBASIC1,54□□□□□ -2,16
Ddx54Q8K4L0 Gm26257-201ENSMUST00000122500 107 ntBASIC1,54□□□□□ -2,16
Ddx54Q8K4L0 Gm22233-201ENSMUST00000157464 114 ntBASIC1,54□□□□□ -2,16
Ddx54Q8K4L0 Gm25868-201ENSMUST00000158253 114 ntBASIC1,54□□□□□ -2,16
Ddx54Q8K4L0 Gm22087-201ENSMUST00000158339 88 ntBASIC1,54□□□□□ -2,16
Ddx54Q8K4L0 Gm23008-201ENSMUST00000158946 80 ntBASIC1,54□□□□□ -2,16
Ddx54Q8K4L0 Mir27b-201ENSMUST00000083541 73 ntBASIC1,54□□□□□ -2,16
Ddx54Q8K4L0 Gm27450-201ENSMUST00000104632 90 ntBASIC1,53□□□□□ -2,16
Ddx54Q8K4L0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1,53□□□□□ -2,16
Ddx54Q8K4L0 Gm23853-201ENSMUST00000158375 104 ntBASIC1,53□□□□□ -2,16
Ddx54Q8K4L0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1,53□□□□□ -2,16
Ddx54Q8K4L0 Mir219b-201ENSMUST00000198317 65 ntBASIC1,53□□□□□ -2,16
Ddx54Q8K4L0 Gm24927-201ENSMUST00000083397 107 ntBASIC1,53□□□□□ -2,16
Ddx54Q8K4L0 Gm24579-201ENSMUST00000103964 144 ntBASIC1,52□□□□□ -2,17
Ddx54Q8K4L0 Gm23072-201ENSMUST00000158243 123 ntBASIC1,52□□□□□ -2,17
Ddx54Q8K4L0 Gm22459-201ENSMUST00000082577 108 ntBASIC1,52□□□□□ -2,17
Ddx54Q8K4L0 Gm23893-201ENSMUST00000158106 134 ntBASIC1,51□□□□□ -2,17
Ddx54Q8K4L0 Gm25641-201ENSMUST00000175135 108 ntBASIC1,51□□□□□ -2,17
Ddx54Q8K4L0 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,51□□□□□ -2,17
Ddx54Q8K4L0 Gm22340-201ENSMUST00000157717 114 ntBASIC1,5□□□□□ -2,17
Ddx54Q8K4L0 Gm22663-201ENSMUST00000158721 102 ntBASIC1,5□□□□□ -2,17
Ddx54Q8K4L0 Gm44211-201ENSMUST00000204867 145 ntBASIC1,5□□□□□ -2,17
Ddx54Q8K4L0 n-R5s157-201ENSMUST00000122543 121 ntBASIC1,49□□□□□ -2,17
Ddx54Q8K4L0 Gm23416-201ENSMUST00000175520 95 ntBASIC1,49□□□□□ -2,17
Ddx54Q8K4L0 Gm22039-201ENSMUST00000157278 132 ntBASIC1,48□□□□□ -2,17
Ddx54Q8K4L0 Gm25055-201ENSMUST00000157369 76 ntBASIC1,47□□□□□ -2,17
Ddx54Q8K4L0 Gm22078-201ENSMUST00000157593 103 ntBASIC1,47□□□□□ -2,17
Ddx54Q8K4L0 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1,47□□□□□ -2,17
Ddx54Q8K4L0 Gm25138-201ENSMUST00000083248 136 ntBASIC1,47□□□□□ -2,17
Ddx54Q8K4L0 Mir3071-201ENSMUST00000093621 80 ntBASIC1,47□□□□□ -2,17
Ddx54Q8K4L0 Gm13577-201ENSMUST00000121365 205 ntBASIC1,46□□□□□ -2,18
Ddx54Q8K4L0 Snord13-201ENSMUST00000157627 104 ntBASIC1,46□□□□□ -2,18
Ddx54Q8K4L0 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1,46□□□□□ -2,18
Ddx54Q8K4L0 Gm23126-201ENSMUST00000104260 134 ntBASIC1,45□□□□□ -2,18
Ddx54Q8K4L0 Gm24725-201ENSMUST00000158229 125 ntBASIC1,45□□□□□ -2,18
Ddx54Q8K4L0 Gm42533-201ENSMUST00000196247 157 ntBASIC1,45□□□□□ -2,18
Ddx54Q8K4L0 CT030170.1-201ENSMUST00000222183 148 ntBASIC1,45□□□□□ -2,18
Ddx54Q8K4L0 Gm26139-201ENSMUST00000180098 107 ntBASIC1,44□□□□□ -2,18
Ddx54Q8K4L0 Mir487b-201ENSMUST00000102265 82 ntBASIC1,43□□□□□ -2,18
Ddx54Q8K4L0 Gm14533-201ENSMUST00000117088 93 ntBASIC1,43□□□□□ -2,18
Ddx54Q8K4L0 Gm25656-201ENSMUST00000158466 66 ntBASIC1,43□□□□□ -2,18
Ddx54Q8K4L0 Mir3070a-201ENSMUST00000175468 89 ntBASIC1,43□□□□□ -2,18
Ddx54Q8K4L0 Gm42677-201ENSMUST00000196363 127 ntBASIC1,43□□□□□ -2,18
Ddx54Q8K4L0 Gm44483-201ENSMUST00000197203 97 ntBASIC1,43□□□□□ -2,18
Ddx54Q8K4L0 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,42□□□□□ -2,18
Ddx54Q8K4L0 Gm23672-201ENSMUST00000157471 107 ntBASIC1,42□□□□□ -2,18
Ddx54Q8K4L0 Gm22431-201ENSMUST00000158545 107 ntBASIC1,42□□□□□ -2,18
Ddx54Q8K4L0 Mir6381-201ENSMUST00000183426 87 ntBASIC1,42□□□□□ -2,18
Ddx54Q8K4L0 Gm25128-201ENSMUST00000083339 76 ntBASIC1,42□□□□□ -2,18
Ddx54Q8K4L0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,41□□□□□ -2,18
Ddx54Q8K4L0 Gm25648-201ENSMUST00000177844 79 ntBASIC1,41□□□□□ -2,18
Ddx54Q8K4L0 Gm27974-201ENSMUST00000183415 105 ntBASIC1,41□□□□□ -2,18
Ddx54Q8K4L0 Mir7010-201ENSMUST00000183464 63 ntBASIC1,41□□□□□ -2,18
Ddx54Q8K4L0 Gm25495-201ENSMUST00000104431 131 ntBASIC1,4□□□□□ -2,19
Ddx54Q8K4L0 Mir15a-201ENSMUST00000175266 84 ntBASIC1,4□□□□□ -2,19
Ddx54Q8K4L0 Gm24201-201ENSMUST00000082946 125 ntBASIC1,4□□□□□ -2,19
Ddx54Q8K4L0 Gm25894-201ENSMUST00000083458 75 ntBASIC1,4□□□□□ -2,19
Retrieved 100 of 76,532 protein–RNA pairs in 121,3 ms