Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir7665-201ENSMUST00000184907 63 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Mir3071-201ENSMUST00000093621 80 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Gm22603-201ENSMUST00000157603 96 ntBASIC1.72□□□□□ -2.13
Trim47Q8C0E3 Gm24723-201ENSMUST00000158233 132 ntBASIC1.72□□□□□ -2.13
Trim47Q8C0E3 Gm26082-201ENSMUST00000104070 127 ntBASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Gm24288-201ENSMUST00000157630 144 ntBASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Mir3968-201ENSMUST00000175355 100 ntBASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Gm27894-201ENSMUST00000184177 92 ntBASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Trim47Q8C0E3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm25656-201ENSMUST00000158466 66 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm27420-201ENSMUST00000183823 79 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm44490-201ENSMUST00000198566 127 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm25802-201ENSMUST00000082639 77 ntBASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Trim47Q8C0E3 Gm22673-201ENSMUST00000104415 131 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Gm6272-201ENSMUST00000121256 171 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Gm24508-201ENSMUST00000180104 107 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Mir6351-201ENSMUST00000183826 99 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Snord96a-201ENSMUST00000082791 81 ntBASIC1.69□□□□□ -2.14
Trim47Q8C0E3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trim47Q8C0E3 Gm24233-201ENSMUST00000104317 122 ntBASIC1.68□□□□□ -2.14
Trim47Q8C0E3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.68□□□□□ -2.14
Trim47Q8C0E3 Gm26259-201ENSMUST00000104778 97 ntBASIC1.67□□□□□ -2.14
Trim47Q8C0E3 Gm23036-201ENSMUST00000157885 99 ntBASIC1.67□□□□□ -2.14
Trim47Q8C0E3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm25087-201ENSMUST00000101992 78 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm25274-201ENSMUST00000104296 135 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm25968-201ENSMUST00000157167 100 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm26007-201ENSMUST00000158798 120 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Mir500-201ENSMUST00000093600 92 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm26467-201ENSMUST00000097257 78 ntBASIC1.66□□□□□ -2.14
Trim47Q8C0E3 Gm23961-201ENSMUST00000104685 97 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm25309-201ENSMUST00000116728 126 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm25055-201ENSMUST00000157369 76 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm24218-201ENSMUST00000180163 105 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm26224-201ENSMUST00000082506 80 ntBASIC1.65□□□□□ -2.15
Trim47Q8C0E3 Gm12432-201ENSMUST00000119540 186 ntBASIC1.64□□□□□ -2.15
Trim47Q8C0E3 Gm24531-201ENSMUST00000157945 100 ntBASIC1.64□□□□□ -2.15
Trim47Q8C0E3 Gm38323-201ENSMUST00000192450 210 ntBASIC1.64□□□□□ -2.15
Trim47Q8C0E3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.64□□□□□ -2.15
Trim47Q8C0E3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trim47Q8C0E3 Gm23122-201ENSMUST00000157645 103 ntBASIC1.62□□□□□ -2.15
Trim47Q8C0E3 Gm22016-201ENSMUST00000158793 114 ntBASIC1.62□□□□□ -2.15
Trim47Q8C0E3 Gm45125-201ENSMUST00000206908 151 ntBASIC1.62□□□□□ -2.15
Trim47Q8C0E3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Gm25715-201ENSMUST00000158627 125 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Gm24710-201ENSMUST00000175235 101 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Gm24135-201ENSMUST00000179085 101 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Mir6962-201ENSMUST00000199512 63 ntBASIC1.61□□□□□ -2.15
Trim47Q8C0E3 Gm23989-201ENSMUST00000117030 66 ntBASIC1.6□□□□□ -2.15
Trim47Q8C0E3 Gm22165-201ENSMUST00000158414 103 ntBASIC1.6□□□□□ -2.15
Trim47Q8C0E3 Mir6240-201ENSMUST00000184281 117 ntBASIC1.6□□□□□ -2.15
Trim47Q8C0E3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.6□□□□□ -2.15
Trim47Q8C0E3 Gm25170-201ENSMUST00000104191 129 ntBASIC1.59□□□□□ -2.15
Trim47Q8C0E3 Gm23180-201ENSMUST00000158686 125 ntBASIC1.59□□□□□ -2.15
Trim47Q8C0E3 Gm24271-201ENSMUST00000102327 111 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Gm22520-201ENSMUST00000158269 129 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Gm24500-201ENSMUST00000158447 124 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Mir3079-201ENSMUST00000175428 90 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Mir7052-201ENSMUST00000184821 65 ntBASIC1.58□□□□□ -2.16
Trim47Q8C0E3 Mir717-201ENSMUST00000102259 109 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm24377-201ENSMUST00000104398 131 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm23853-201ENSMUST00000158375 104 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm38274-201ENSMUST00000195689 148 ntBASIC1.57□□□□□ -2.16
Trim47Q8C0E3 Gm26338-201ENSMUST00000102372 110 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Traj60-201ENSMUST00000167781 54 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm23410-201ENSMUST00000179967 107 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm27980-201ENSMUST00000184094 169 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Mir7059-201ENSMUST00000184825 59 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm22505-201ENSMUST00000082956 108 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm22363-201ENSMUST00000083100 108 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 Gm23814-201ENSMUST00000083230 102 ntBASIC1.56□□□□□ -2.16
Trim47Q8C0E3 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.55□□□□□ -2.16
Trim47Q8C0E3 Gm22746-201ENSMUST00000082494 107 ntBASIC1.55□□□□□ -2.16
Trim47Q8C0E3 Gm25326-201ENSMUST00000101903 107 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Gm26301-201ENSMUST00000104813 95 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Gm23416-201ENSMUST00000175520 95 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Mir448-201ENSMUST00000083516 112 ntBASIC1.54□□□□□ -2.16
Trim47Q8C0E3 Gm24942-201ENSMUST00000158328 114 ntBASIC1.53□□□□□ -2.16
Trim47Q8C0E3 Mir343-201ENSMUST00000102360 75 ntBASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Gm22720-201ENSMUST00000122710 87 ntBASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Gm25993-201ENSMUST00000175391 80 ntBASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Snord57-201ENSMUST00000083338 72 ntBASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trim47Q8C0E3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Gm24895-201ENSMUST00000122742 74 ntBASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Gm23955-201ENSMUST00000157214 100 ntBASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Gm23329-201ENSMUST00000157415 108 ntBASIC1.51□□□□□ -2.17
Trim47Q8C0E3 Gm24808-201ENSMUST00000157993 118 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 175.6 ms