Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm24580-201ENSMUST00000103965 131 ntBASIC1.06□□□□□ -2.24
Shkbp1Q6P7W2 Gm25495-201ENSMUST00000104431 131 ntBASIC1.06□□□□□ -2.24
Shkbp1Q6P7W2 Gm27717-201ENSMUST00000183933 151 ntBASIC1.06□□□□□ -2.24
Shkbp1Q6P7W2 Gm23245-201ENSMUST00000083370 135 ntBASIC1.06□□□□□ -2.24
Shkbp1Q6P7W2 Mir27b-201ENSMUST00000083541 73 ntBASIC1.06□□□□□ -2.24
Shkbp1Q6P7W2 Mir741-201ENSMUST00000103931 71 ntBASIC1.05□□□□□ -2.24
Shkbp1Q6P7W2 Gm22048-201ENSMUST00000104721 89 ntBASIC1.05□□□□□ -2.24
Shkbp1Q6P7W2 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.05□□□□□ -2.24
Shkbp1Q6P7W2 Gm22565-201ENSMUST00000175540 69 ntBASIC1.05□□□□□ -2.24
Shkbp1Q6P7W2 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Shkbp1Q6P7W2 Gm27549-201ENSMUST00000183508 62 ntBASIC1.05□□□□□ -2.24
Shkbp1Q6P7W2 Gm42533-201ENSMUST00000196247 157 ntBASIC1.05□□□□□ -2.24
Shkbp1Q6P7W2 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Shkbp1Q6P7W2 Gm24233-201ENSMUST00000104317 122 ntBASIC1.04□□□□□ -2.24
Shkbp1Q6P7W2 Gm25328-201ENSMUST00000175013 107 ntBASIC1.04□□□□□ -2.24
Shkbp1Q6P7W2 Mir6985-201ENSMUST00000184641 61 ntBASIC1.04□□□□□ -2.24
Shkbp1Q6P7W2 Gm44458-201ENSMUST00000196594 143 ntBASIC1.04□□□□□ -2.24
Shkbp1Q6P7W2 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Shkbp1Q6P7W2 Gm22663-201ENSMUST00000158721 102 ntBASIC1.03□□□□□ -2.24
Shkbp1Q6P7W2 Gm22520-201ENSMUST00000158269 129 ntBASIC1.02□□□□□ -2.25
Shkbp1Q6P7W2 Mir3108-201ENSMUST00000175500 79 ntBASIC1.02□□□□□ -2.25
Shkbp1Q6P7W2 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.02□□□□□ -2.25
Shkbp1Q6P7W2 Gm23012-201ENSMUST00000104149 83 ntBASIC1.01□□□□□ -2.25
Shkbp1Q6P7W2 Gm23893-201ENSMUST00000158106 134 ntBASIC1.01□□□□□ -2.25
Shkbp1Q6P7W2 Gm25300-201ENSMUST00000175284 84 ntBASIC1.01□□□□□ -2.25
Shkbp1Q6P7W2 Gm29432-201ENSMUST00000185397 139 ntBASIC1.01□□□□□ -2.25
Shkbp1Q6P7W2 Gm44211-201ENSMUST00000204867 145 ntBASIC1.01□□□□□ -2.25
Shkbp1Q6P7W2 Gm45655-201ENSMUST00000211625 160 ntBASIC1□□□□□ -2.25
Shkbp1Q6P7W2 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Shkbp1Q6P7W2 Gm24777-201ENSMUST00000157644 107 ntBASIC0.99□□□□□ -2.25
Shkbp1Q6P7W2 Mir15a-201ENSMUST00000175266 84 ntBASIC0.99□□□□□ -2.25
Shkbp1Q6P7W2 Gm23416-201ENSMUST00000175520 95 ntBASIC0.99□□□□□ -2.25
Shkbp1Q6P7W2 Mir7010-201ENSMUST00000183464 63 ntBASIC0.99□□□□□ -2.25
Shkbp1Q6P7W2 Gm24342-201ENSMUST00000103907 104 ntBASIC0.98□□□□□ -2.25
Shkbp1Q6P7W2 Mir669h-201ENSMUST00000116944 125 ntBASIC0.98□□□□□ -2.25
Shkbp1Q6P7W2 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.98□□□□□ -2.25
Shkbp1Q6P7W2 Snord95-201ENSMUST00000082846 68 ntBASIC0.98□□□□□ -2.25
Shkbp1Q6P7W2 Gm25138-201ENSMUST00000083248 136 ntBASIC0.98□□□□□ -2.25
Shkbp1Q6P7W2 Mir10b-201ENSMUST00000083566 68 ntBASIC0.98□□□□□ -2.25
Shkbp1Q6P7W2 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.97□□□□□ -2.25
Shkbp1Q6P7W2 Gm26438-201ENSMUST00000082593 107 ntBASIC0.97□□□□□ -2.25
Shkbp1Q6P7W2 Mir344-201ENSMUST00000083634 95 ntBASIC0.97□□□□□ -2.25
Shkbp1Q6P7W2 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
Shkbp1Q6P7W2 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.96□□□□□ -2.26
Shkbp1Q6P7W2 Gm24331-201ENSMUST00000175099 67 ntBASIC0.96□□□□□ -2.26
Shkbp1Q6P7W2 Gm23801-201ENSMUST00000175561 67 ntBASIC0.96□□□□□ -2.26
Shkbp1Q6P7W2 Gm24485-201ENSMUST00000178283 67 ntBASIC0.96□□□□□ -2.26
Shkbp1Q6P7W2 Mir6380-201ENSMUST00000184334 81 ntBASIC0.96□□□□□ -2.26
Shkbp1Q6P7W2 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Shkbp1Q6P7W2 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.95□□□□□ -2.26
Shkbp1Q6P7W2 Snord45b-201ENSMUST00000082797 71 ntBASIC0.95□□□□□ -2.26
Shkbp1Q6P7W2 Gm25166-201ENSMUST00000158909 111 ntBASIC0.94□□□□□ -2.26
Shkbp1Q6P7W2 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.94□□□□□ -2.26
Shkbp1Q6P7W2 Gm27937-201ENSMUST00000183605 88 ntBASIC0.94□□□□□ -2.26
Shkbp1Q6P7W2 Gm27587-201ENSMUST00000185116 163 ntBASIC0.94□□□□□ -2.26
Shkbp1Q6P7W2 Gm42677-201ENSMUST00000196363 127 ntBASIC0.94□□□□□ -2.26
Shkbp1Q6P7W2 Gm25552-201ENSMUST00000158081 91 ntBASIC0.93□□□□□ -2.26
Shkbp1Q6P7W2 Gm23856-201ENSMUST00000158380 99 ntBASIC0.93□□□□□ -2.26
Shkbp1Q6P7W2 Gm25656-201ENSMUST00000158466 66 ntBASIC0.93□□□□□ -2.26
Shkbp1Q6P7W2 Gm27554-201ENSMUST00000185074 98 ntBASIC0.93□□□□□ -2.26
Shkbp1Q6P7W2 Mir101a-201ENSMUST00000083517 83 ntBASIC0.93□□□□□ -2.26
Shkbp1Q6P7W2 Mir33-201ENSMUST00000083531 69 ntBASIC0.93□□□□□ -2.26
Shkbp1Q6P7W2 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.93□□□□□ -2.26
Shkbp1Q6P7W2 Mir876-201ENSMUST00000104659 81 ntBASIC0.92□□□□□ -2.26
Shkbp1Q6P7W2 Gm25055-201ENSMUST00000157369 76 ntBASIC0.92□□□□□ -2.26
Shkbp1Q6P7W2 Gm22074-201ENSMUST00000158595 113 ntBASIC0.92□□□□□ -2.26
Shkbp1Q6P7W2 Gm27974-201ENSMUST00000183415 105 ntBASIC0.92□□□□□ -2.26
Shkbp1Q6P7W2 Gm25683-201ENSMUST00000083940 131 ntBASIC0.92□□□□□ -2.26
Shkbp1Q6P7W2 Gm25641-201ENSMUST00000175135 108 ntBASIC0.91□□□□□ -2.26
Shkbp1Q6P7W2 Gm27977-201ENSMUST00000185159 111 ntBASIC0.91□□□□□ -2.26
Shkbp1Q6P7W2 Gm25894-201ENSMUST00000083458 75 ntBASIC0.91□□□□□ -2.26
Shkbp1Q6P7W2 Gm24431-201ENSMUST00000104073 66 ntBASIC0.9□□□□□ -2.27
Shkbp1Q6P7W2 Gm25496-201ENSMUST00000104430 120 ntBASIC0.9□□□□□ -2.27
Shkbp1Q6P7W2 Gm14533-201ENSMUST00000117088 93 ntBASIC0.9□□□□□ -2.27
Shkbp1Q6P7W2 Mir494-201ENSMUST00000093632 85 ntBASIC0.9□□□□□ -2.27
Shkbp1Q6P7W2 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.89□□□□□ -2.27
Shkbp1Q6P7W2 Gm24321-201ENSMUST00000175348 80 ntBASIC0.89□□□□□ -2.27
Shkbp1Q6P7W2 Mir7673-201ENSMUST00000184567 64 ntBASIC0.89□□□□□ -2.27
Shkbp1Q6P7W2 Gm44490-201ENSMUST00000198566 127 ntBASIC0.89□□□□□ -2.27
Shkbp1Q6P7W2 Mir15b-201ENSMUST00000083646 64 ntBASIC0.89□□□□□ -2.27
Shkbp1Q6P7W2 Gm24396-201ENSMUST00000116905 93 ntBASIC0.88□□□□□ -2.27
Shkbp1Q6P7W2 Gm22459-201ENSMUST00000082577 108 ntBASIC0.88□□□□□ -2.27
Shkbp1Q6P7W2 Mir200b-201ENSMUST00000083615 70 ntBASIC0.88□□□□□ -2.27
Shkbp1Q6P7W2 Gm27980-201ENSMUST00000184094 169 ntBASIC0.87□□□□□ -2.27
Shkbp1Q6P7W2 Gm38274-201ENSMUST00000195689 148 ntBASIC0.87□□□□□ -2.27
Shkbp1Q6P7W2 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.87□□□□□ -2.27
Shkbp1Q6P7W2 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Shkbp1Q6P7W2 Gm23008-201ENSMUST00000158946 80 ntBASIC0.86□□□□□ -2.27
Shkbp1Q6P7W2 Gm23649-201ENSMUST00000179007 107 ntBASIC0.86□□□□□ -2.27
Shkbp1Q6P7W2 Gm24020-201ENSMUST00000180156 108 ntBASIC0.86□□□□□ -2.27
Shkbp1Q6P7W2 Snord32a-201ENSMUST00000083285 83 ntBASIC0.86□□□□□ -2.27
Shkbp1Q6P7W2 Mir3071-201ENSMUST00000093621 80 ntBASIC0.86□□□□□ -2.27
Shkbp1Q6P7W2 Gm22087-201ENSMUST00000158339 88 ntBASIC0.85□□□□□ -2.27
Shkbp1Q6P7W2 Gm27943-201ENSMUST00000184844 116 ntBASIC0.85□□□□□ -2.27
Shkbp1Q6P7W2 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.85□□□□□ -2.27
Shkbp1Q6P7W2 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Shkbp1Q6P7W2 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Shkbp1Q6P7W2 Gm24288-201ENSMUST00000157630 144 ntBASIC0.84□□□□□ -2.27
Shkbp1Q6P7W2 Gm26338-201ENSMUST00000102372 110 ntBASIC0.83□□□□□ -2.28
Shkbp1Q6P7W2 Gm24579-201ENSMUST00000103964 144 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 148.8 ms