Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm24808-201ENSMUST00000157993 118 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Gm24725-201ENSMUST00000158229 125 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Gm22087-201ENSMUST00000158339 88 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Gm27937-201ENSMUST00000183605 88 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Gm27717-201ENSMUST00000183933 151 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Mir7673-201ENSMUST00000184567 64 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 CT030170.1-201ENSMUST00000222183 148 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Snord95-201ENSMUST00000082846 68 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Mir200b-201ENSMUST00000083615 70 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Mir3098-201ENSMUST00000175416 87 ntBASIC1.37□□□□□ -2.19
Sh3rf1Q69ZI1 Gm27711-201ENSMUST00000183802 118 ntBASIC1.37□□□□□ -2.19
Sh3rf1Q69ZI1 Gm38323-201ENSMUST00000192450 210 ntBASIC1.37□□□□□ -2.19
Sh3rf1Q69ZI1 Gm12432-201ENSMUST00000119540 186 ntBASIC1.36□□□□□ -2.19
Sh3rf1Q69ZI1 Gm22663-201ENSMUST00000158721 102 ntBASIC1.36□□□□□ -2.19
Sh3rf1Q69ZI1 Gm25648-201ENSMUST00000177844 79 ntBASIC1.36□□□□□ -2.19
Sh3rf1Q69ZI1 Gm25186-201ENSMUST00000083909 108 ntBASIC1.36□□□□□ -2.19
Sh3rf1Q69ZI1 Gm23708-201ENSMUST00000104367 123 ntBASIC1.35□□□□□ -2.19
Sh3rf1Q69ZI1 Gm23329-201ENSMUST00000157415 108 ntBASIC1.35□□□□□ -2.19
Sh3rf1Q69ZI1 Gm26438-201ENSMUST00000082593 107 ntBASIC1.35□□□□□ -2.19
Sh3rf1Q69ZI1 Mir448-201ENSMUST00000083516 112 ntBASIC1.35□□□□□ -2.19
Sh3rf1Q69ZI1 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.35□□□□□ -2.19
Sh3rf1Q69ZI1 Gm24500-201ENSMUST00000158447 124 ntBASIC1.34□□□□□ -2.19
Sh3rf1Q69ZI1 Mir7059-201ENSMUST00000184825 59 ntBASIC1.34□□□□□ -2.19
Sh3rf1Q69ZI1 Gm22459-201ENSMUST00000082577 108 ntBASIC1.34□□□□□ -2.19
Sh3rf1Q69ZI1 Mir343-201ENSMUST00000102360 75 ntBASIC1.33□□□□□ -2.2
Sh3rf1Q69ZI1 Gm24233-201ENSMUST00000104317 122 ntBASIC1.33□□□□□ -2.2
Sh3rf1Q69ZI1 Gm16399-201ENSMUST00000181423 219 ntBASIC1.33□□□□□ -2.2
Sh3rf1Q69ZI1 Gm23730-201ENSMUST00000083236 107 ntBASIC1.33□□□□□ -2.2
Sh3rf1Q69ZI1 Gm24612-201ENSMUST00000083267 107 ntBASIC1.33□□□□□ -2.2
Sh3rf1Q69ZI1 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Sh3rf1Q69ZI1 Gm26301-201ENSMUST00000104813 95 ntBASIC1.32□□□□□ -2.2
Sh3rf1Q69ZI1 Traj60-201ENSMUST00000167781 54 ntBASIC1.32□□□□□ -2.2
Sh3rf1Q69ZI1 Mir7052-201ENSMUST00000184821 65 ntBASIC1.32□□□□□ -2.2
Sh3rf1Q69ZI1 Gm25128-201ENSMUST00000083339 76 ntBASIC1.32□□□□□ -2.2
Sh3rf1Q69ZI1 Gm24865-201ENSMUST00000103246 96 ntBASIC1.31□□□□□ -2.2
Sh3rf1Q69ZI1 Gm25495-201ENSMUST00000104431 131 ntBASIC1.31□□□□□ -2.2
Sh3rf1Q69ZI1 Mir3079-201ENSMUST00000175428 90 ntBASIC1.31□□□□□ -2.2
Sh3rf1Q69ZI1 Gm42677-201ENSMUST00000196363 127 ntBASIC1.31□□□□□ -2.2
Sh3rf1Q69ZI1 Gm23245-201ENSMUST00000083370 135 ntBASIC1.31□□□□□ -2.2
Sh3rf1Q69ZI1 Gm24342-201ENSMUST00000103907 104 ntBASIC1.3□□□□□ -2.2
Sh3rf1Q69ZI1 Gm23989-201ENSMUST00000117030 66 ntBASIC1.3□□□□□ -2.2
Sh3rf1Q69ZI1 Mir1954-201ENSMUST00000175595 86 ntBASIC1.3□□□□□ -2.2
Sh3rf1Q69ZI1 Mir6394-201ENSMUST00000184738 99 ntBASIC1.3□□□□□ -2.2
Sh3rf1Q69ZI1 AC238676.2-201ENSMUST00000220910 94 ntBASIC1.3□□□□□ -2.2
Sh3rf1Q69ZI1 Gm25465-201ENSMUST00000157716 105 ntBASIC1.29□□□□□ -2.2
Sh3rf1Q69ZI1 Gm22520-201ENSMUST00000158269 129 ntBASIC1.29□□□□□ -2.2
Sh3rf1Q69ZI1 Gm23853-201ENSMUST00000158375 104 ntBASIC1.29□□□□□ -2.2
Sh3rf1Q69ZI1 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
Sh3rf1Q69ZI1 Gm14533-201ENSMUST00000117088 93 ntBASIC1.28□□□□□ -2.2
Sh3rf1Q69ZI1 Gm23328-201ENSMUST00000157418 132 ntBASIC1.28□□□□□ -2.2
Sh3rf1Q69ZI1 Gm22233-201ENSMUST00000157464 114 ntBASIC1.28□□□□□ -2.2
Sh3rf1Q69ZI1 Gm25868-201ENSMUST00000158253 114 ntBASIC1.28□□□□□ -2.2
Sh3rf1Q69ZI1 Gm27656-201ENSMUST00000185055 80 ntBASIC1.28□□□□□ -2.2
Sh3rf1Q69ZI1 Mir211-201ENSMUST00000083651 106 ntBASIC1.28□□□□□ -2.2
Sh3rf1Q69ZI1 Gm25524-201ENSMUST00000101821 107 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Snord71-201ENSMUST00000104361 85 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Gm22717-201ENSMUST00000122703 171 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Gm25055-201ENSMUST00000157369 76 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Gm24288-201ENSMUST00000157630 144 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Gm22485-201ENSMUST00000157990 109 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Gm25440-201ENSMUST00000158279 154 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Gm25656-201ENSMUST00000158466 66 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Gm23416-201ENSMUST00000175520 95 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Gm29344-201ENSMUST00000068143 210 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Mir3071-201ENSMUST00000093621 80 ntBASIC1.27□□□□□ -2.21
Sh3rf1Q69ZI1 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.26□□□□□ -2.21
Sh3rf1Q69ZI1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Sh3rf1Q69ZI1 Gm22780-201ENSMUST00000104084 132 ntBASIC1.26□□□□□ -2.21
Sh3rf1Q69ZI1 Mir344-201ENSMUST00000083634 95 ntBASIC1.26□□□□□ -2.21
Sh3rf1Q69ZI1 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Sh3rf1Q69ZI1 Gm22401-201ENSMUST00000174927 117 ntBASIC1.25□□□□□ -2.21
Sh3rf1Q69ZI1 Gm23636-201ENSMUST00000175070 95 ntBASIC1.25□□□□□ -2.21
Sh3rf1Q69ZI1 Gm44211-201ENSMUST00000204867 145 ntBASIC1.25□□□□□ -2.21
Sh3rf1Q69ZI1 Gm23340-201ENSMUST00000158955 123 ntBASIC1.24□□□□□ -2.21
Sh3rf1Q69ZI1 Mir7063-201ENSMUST00000184158 91 ntBASIC1.24□□□□□ -2.21
Sh3rf1Q69ZI1 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.23□□□□□ -2.21
Sh3rf1Q69ZI1 Gm25010-201ENSMUST00000158403 65 ntBASIC1.23□□□□□ -2.21
Sh3rf1Q69ZI1 Mir6985-201ENSMUST00000184641 61 ntBASIC1.23□□□□□ -2.21
Sh3rf1Q69ZI1 Gm42533-201ENSMUST00000196247 157 ntBASIC1.23□□□□□ -2.21
Sh3rf1Q69ZI1 Gm23347-201ENSMUST00000083823 82 ntBASIC1.23□□□□□ -2.21
Sh3rf1Q69ZI1 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Sh3rf1Q69ZI1 Gm25166-201ENSMUST00000158909 111 ntBASIC1.22□□□□□ -2.21
Sh3rf1Q69ZI1 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.22□□□□□ -2.21
Sh3rf1Q69ZI1 Gm26338-201ENSMUST00000102372 110 ntBASIC1.21□□□□□ -2.22
Sh3rf1Q69ZI1 Gm24070-201ENSMUST00000104519 130 ntBASIC1.21□□□□□ -2.22
Sh3rf1Q69ZI1 Gm25715-201ENSMUST00000158627 125 ntBASIC1.21□□□□□ -2.22
Sh3rf1Q69ZI1 Gm23630-201ENSMUST00000175292 104 ntBASIC1.21□□□□□ -2.22
Sh3rf1Q69ZI1 Gm42506-201ENSMUST00000202009 150 ntBASIC1.21□□□□□ -2.22
Sh3rf1Q69ZI1 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.21□□□□□ -2.22
Sh3rf1Q69ZI1 Gm25138-201ENSMUST00000083248 136 ntBASIC1.21□□□□□ -2.22
Sh3rf1Q69ZI1 Gm22595-201ENSMUST00000104250 130 ntBASIC1.2□□□□□ -2.22
Sh3rf1Q69ZI1 Gm24400-201ENSMUST00000157865 107 ntBASIC1.2□□□□□ -2.22
Sh3rf1Q69ZI1 Gm22565-201ENSMUST00000175540 69 ntBASIC1.2□□□□□ -2.22
Sh3rf1Q69ZI1 Mir7010-201ENSMUST00000183464 63 ntBASIC1.2□□□□□ -2.22
Sh3rf1Q69ZI1 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.2□□□□□ -2.22
Sh3rf1Q69ZI1 Gm26363-201ENSMUST00000158866 83 ntBASIC1.19□□□□□ -2.22
Sh3rf1Q69ZI1 Gm27980-201ENSMUST00000184094 169 ntBASIC1.19□□□□□ -2.22
Sh3rf1Q69ZI1 Gm24942-201ENSMUST00000158328 114 ntBASIC1.18□□□□□ -2.22
Sh3rf1Q69ZI1 Gm25768-201ENSMUST00000158570 98 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms