Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Mir1904-201ENSMUST00000122702 80 ntBASIC1,23□□□□□ -2,21
Trim28Q62318 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1,23□□□□□ -2,21
Trim28Q62318 Gm29432-201ENSMUST00000185397 139 ntBASIC1,23□□□□□ -2,21
Trim28Q62318 Mir27b-201ENSMUST00000083541 73 ntBASIC1,23□□□□□ -2,21
Trim28Q62318 Gm24725-201ENSMUST00000158229 125 ntBASIC1,22□□□□□ -2,21
Trim28Q62318 Gm22074-201ENSMUST00000158595 113 ntBASIC1,22□□□□□ -2,21
Trim28Q62318 Mir7673-201ENSMUST00000184567 64 ntBASIC1,22□□□□□ -2,21
Trim28Q62318 Gm27450-201ENSMUST00000104632 90 ntBASIC1,21□□□□□ -2,22
Trim28Q62318 n-R5s157-201ENSMUST00000122543 121 ntBASIC1,21□□□□□ -2,22
Trim28Q62318 Gm23072-201ENSMUST00000158243 123 ntBASIC1,21□□□□□ -2,22
Trim28Q62318 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,21□□□□□ -2,22
Trim28Q62318 Mir376b-201ENSMUST00000195930 82 ntBASIC1,21□□□□□ -2,22
Trim28Q62318 Gm45655-201ENSMUST00000211625 160 ntBASIC1,21□□□□□ -2,22
Trim28Q62318 Mir377-201ENSMUST00000083504 68 ntBASIC1,21□□□□□ -2,22
Trim28Q62318 Mir500-201ENSMUST00000093600 92 ntBASIC1,21□□□□□ -2,22
Trim28Q62318 Gm25440-201ENSMUST00000158279 154 ntBASIC1,2□□□□□ -2,22
Trim28Q62318 Gm22087-201ENSMUST00000158339 88 ntBASIC1,2□□□□□ -2,22
Trim28Q62318 Gm23649-201ENSMUST00000179007 107 ntBASIC1,2□□□□□ -2,22
Trim28Q62318 Gm43944-201ENSMUST00000205220 120 ntBASIC1,2□□□□□ -2,22
Trim28Q62318 Gm24311-201ENSMUST00000082570 104 ntBASIC1,2□□□□□ -2,22
Trim28Q62318 Gm23347-201ENSMUST00000083823 82 ntBASIC1,2□□□□□ -2,22
Trim28Q62318 Mir100-201ENSMUST00000175270 80 ntBASIC1,19□□□□□ -2,22
Trim28Q62318 Mir7091-201ENSMUST00000184075 79 ntBASIC1,19□□□□□ -2,22
Trim28Q62318 Gm24927-201ENSMUST00000083397 107 ntBASIC1,19□□□□□ -2,22
Trim28Q62318 Mir15b-201ENSMUST00000083646 64 ntBASIC1,19□□□□□ -2,22
Trim28Q62318 Gm24342-201ENSMUST00000103907 104 ntBASIC1,18□□□□□ -2,22
Trim28Q62318 Snord71-201ENSMUST00000104361 85 ntBASIC1,18□□□□□ -2,22
Trim28Q62318 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1,18□□□□□ -2,22
Trim28Q62318 Gm26257-201ENSMUST00000122500 107 ntBASIC1,18□□□□□ -2,22
Trim28Q62318 Gm22039-201ENSMUST00000157278 132 ntBASIC1,18□□□□□ -2,22
Trim28Q62318 Gm22078-201ENSMUST00000157593 103 ntBASIC1,18□□□□□ -2,22
Trim28Q62318 Gm22541-201ENSMUST00000158165 127 ntBASIC1,18□□□□□ -2,22
Trim28Q62318 AC211878.4-201ENSMUST00000220970 262 ntBASIC1,18□□□□□ -2,22
Trim28Q62318 Gm23301-201ENSMUST00000082713 65 ntBASIC1,18□□□□□ -2,22
Trim28Q62318 Mir487b-201ENSMUST00000102265 82 ntBASIC1,17□□□□□ -2,22
Trim28Q62318 Gm25040-201ENSMUST00000103877 66 ntBASIC1,17□□□□□ -2,22
Trim28Q62318 Gm24549-201ENSMUST00000158647 139 ntBASIC1,17□□□□□ -2,22
Trim28Q62318 Mir6394-201ENSMUST00000184738 99 ntBASIC1,17□□□□□ -2,22
Trim28Q62318 Gm26438-201ENSMUST00000082593 107 ntBASIC1,17□□□□□ -2,22
Trim28Q62318 Mir344-201ENSMUST00000083634 95 ntBASIC1,17□□□□□ -2,22
Trim28Q62318 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,16□□□□□ -2,22
Trim28Q62318 Gm23672-201ENSMUST00000157471 107 ntBASIC1,16□□□□□ -2,22
Trim28Q62318 Gm22466-201ENSMUST00000175278 69 ntBASIC1,16□□□□□ -2,22
Trim28Q62318 Gm27587-201ENSMUST00000185116 163 ntBASIC1,16□□□□□ -2,22
Trim28Q62318 Gm27977-201ENSMUST00000185159 111 ntBASIC1,16□□□□□ -2,22
Trim28Q62318 Mir324-201ENSMUST00000083600 89 ntBASIC1,16□□□□□ -2,22
Trim28Q62318 Gm24271-201ENSMUST00000102327 111 ntBASIC1,15□□□□□ -2,23
Trim28Q62318 Gm23012-201ENSMUST00000104149 83 ntBASIC1,15□□□□□ -2,23
Trim28Q62318 Gm25416-201ENSMUST00000104221 107 ntBASIC1,15□□□□□ -2,23
Trim28Q62318 Gm27937-201ENSMUST00000183605 88 ntBASIC1,15□□□□□ -2,23
Trim28Q62318 Gm22459-201ENSMUST00000082577 108 ntBASIC1,15□□□□□ -2,23
Trim28Q62318 Gm24201-201ENSMUST00000082946 125 ntBASIC1,15□□□□□ -2,23
Trim28Q62318 Gm24612-201ENSMUST00000083267 107 ntBASIC1,15□□□□□ -2,23
Trim28Q62318 Mir3071-201ENSMUST00000093621 80 ntBASIC1,15□□□□□ -2,23
Trim28Q62318 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1,14□□□□□ -2,23
Trim28Q62318 Gm23500-201ENSMUST00000157735 98 ntBASIC1,14□□□□□ -2,23
Trim28Q62318 Gm22100-201ENSMUST00000157926 63 ntBASIC1,14□□□□□ -2,23
Trim28Q62318 Gm25166-201ENSMUST00000158909 111 ntBASIC1,14□□□□□ -2,23
Trim28Q62318 Gm27554-201ENSMUST00000185074 98 ntBASIC1,14□□□□□ -2,23
Trim28Q62318 Mir1949-202ENSMUST00000199259 70 ntBASIC1,14□□□□□ -2,23
Trim28Q62318 Gm42506-201ENSMUST00000202009 150 ntBASIC1,14□□□□□ -2,23
Trim28Q62318 CT030170.1-201ENSMUST00000222183 148 ntBASIC1,14□□□□□ -2,23
Trim28Q62318 CT025630.1-201ENSMUST00000227901 172 ntBASIC1,14□□□□□ -2,23
Trim28Q62318 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1,13□□□□□ -2,23
Trim28Q62318 Gm26139-201ENSMUST00000180098 107 ntBASIC1,13□□□□□ -2,23
Trim28Q62318 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,12□□□□□ -2,23
Trim28Q62318 Gm6272-201ENSMUST00000121256 171 ntBASIC1,12□□□□□ -2,23
Trim28Q62318 Mir6985-201ENSMUST00000184641 61 ntBASIC1,12□□□□□ -2,23
Trim28Q62318 Gm38323-201ENSMUST00000192450 210 ntBASIC1,11□□□□□ -2,23
Trim28Q62318 Gm23730-201ENSMUST00000083236 107 ntBASIC1,11□□□□□ -2,23
Trim28Q62318 Mir30a-201ENSMUST00000083471 71 ntBASIC1,11□□□□□ -2,23
Trim28Q62318 Mir10b-201ENSMUST00000083566 68 ntBASIC1,11□□□□□ -2,23
Trim28Q62318 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,1□□□□□ -2,23
Trim28Q62318 Gm24579-201ENSMUST00000103964 144 ntBASIC1,1□□□□□ -2,23
Trim28Q62318 Gm23708-201ENSMUST00000104367 123 ntBASIC1,1□□□□□ -2,23
Trim28Q62318 Mir669h-201ENSMUST00000116944 125 ntBASIC1,1□□□□□ -2,23
Trim28Q62318 Gm22720-201ENSMUST00000122710 87 ntBASIC1,1□□□□□ -2,23
Trim28Q62318 Gm22520-201ENSMUST00000158269 129 ntBASIC1,1□□□□□ -2,23
Trim28Q62318 Gm24020-201ENSMUST00000180156 108 ntBASIC1,1□□□□□ -2,23
Trim28Q62318 Snord95-201ENSMUST00000082846 68 ntBASIC1,1□□□□□ -2,23
Trim28Q62318 Gm25055-201ENSMUST00000157369 76 ntBASIC1,09□□□□□ -2,23
Trim28Q62318 Gm22565-201ENSMUST00000175540 69 ntBASIC1,09□□□□□ -2,23
Trim28Q62318 Gm44458-201ENSMUST00000196594 143 ntBASIC1,09□□□□□ -2,23
Trim28Q62318 AC160976.1-201ENSMUST00000215092 148 ntBASIC1,09□□□□□ -2,23
Trim28Q62318 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,09□□□□□ -2,23
Trim28Q62318 Gm24233-201ENSMUST00000104317 122 ntBASIC1,08□□□□□ -2,24
Trim28Q62318 Gm26274-201ENSMUST00000157103 321 ntBASIC1,08□□□□□ -2,24
Trim28Q62318 Gm25010-201ENSMUST00000158403 65 ntBASIC1,08□□□□□ -2,24
Trim28Q62318 Gm25641-201ENSMUST00000175135 108 ntBASIC1,08□□□□□ -2,24
Trim28Q62318 Gm13065-201ENSMUST00000119178 141 ntBASIC1,07□□□□□ -2,24
Trim28Q62318 Gm24288-201ENSMUST00000157630 144 ntBASIC1,07□□□□□ -2,24
Trim28Q62318 Gm25648-201ENSMUST00000177844 79 ntBASIC1,07□□□□□ -2,24
Trim28Q62318 Gm23989-201ENSMUST00000117030 66 ntBASIC1,06□□□□□ -2,24
Trim28Q62318 Mir3079-201ENSMUST00000175428 90 ntBASIC1,06□□□□□ -2,24
Trim28Q62318 Gm27974-201ENSMUST00000183415 105 ntBASIC1,06□□□□□ -2,24
Trim28Q62318 Gm44211-201ENSMUST00000204867 145 ntBASIC1,06□□□□□ -2,24
Trim28Q62318 Snord35a-201ENSMUST00000083884 90 ntBASIC1,06□□□□□ -2,24
Trim28Q62318 Gm24777-201ENSMUST00000157644 107 ntBASIC1,04□□□□□ -2,24
Trim28Q62318 n-R5s96-201ENSMUST00000082574 124 ntBASIC1,04□□□□□ -2,24
Trim28Q62318 Gm25894-201ENSMUST00000083458 75 ntBASIC1,04□□□□□ -2,24
Retrieved 100 of 76,532 protein–RNA pairs in 11,6 ms