Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm22788-201ENSMUST00000157876 61 ntBASIC1.63□□□□□ -2.15
Col17a1Q07563 Gm26089-201ENSMUST00000157898 107 ntBASIC1.63□□□□□ -2.15
Col17a1Q07563 Gm25730-201ENSMUST00000178753 165 ntBASIC1.63□□□□□ -2.15
Col17a1Q07563 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Col17a1Q07563 Gm24915-201ENSMUST00000157288 78 ntBASIC1.63□□□□□ -2.15
Col17a1Q07563 Gm25885-201ENSMUST00000157779 109 ntBASIC1.63□□□□□ -2.15
Col17a1Q07563 Gm25328-201ENSMUST00000175013 107 ntBASIC1.63□□□□□ -2.15
Col17a1Q07563 Snord87-201ENSMUST00000175437 87 ntBASIC1.63□□□□□ -2.15
Col17a1Q07563 Snora75-201ENSMUST00000082903 133 ntBASIC1.63□□□□□ -2.15
Col17a1Q07563 Gm26375-201ENSMUST00000101829 106 ntBASIC1.62□□□□□ -2.15
Col17a1Q07563 Gm10548-202ENSMUST00000165672 272 ntBASIC1.62□□□□□ -2.15
Col17a1Q07563 Gm27711-201ENSMUST00000183802 118 ntBASIC1.62□□□□□ -2.15
Col17a1Q07563 Gm29432-201ENSMUST00000185397 139 ntBASIC1.62□□□□□ -2.15
Col17a1Q07563 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Col17a1Q07563 Gm25423-201ENSMUST00000157609 107 ntBASIC1.61□□□□□ -2.15
Col17a1Q07563 Gm24290-201ENSMUST00000157634 96 ntBASIC1.61□□□□□ -2.15
Col17a1Q07563 Mir3061-201ENSMUST00000175129 91 ntBASIC1.61□□□□□ -2.15
Col17a1Q07563 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.6□□□□□ -2.15
Col17a1Q07563 Snord13-201ENSMUST00000157627 104 ntBASIC1.6□□□□□ -2.15
Col17a1Q07563 Gm22087-201ENSMUST00000158339 88 ntBASIC1.6□□□□□ -2.15
Col17a1Q07563 Gm25693-201ENSMUST00000175443 85 ntBASIC1.6□□□□□ -2.15
Col17a1Q07563 Mir3108-201ENSMUST00000175500 79 ntBASIC1.6□□□□□ -2.15
Col17a1Q07563 Gm29344-201ENSMUST00000068143 210 ntBASIC1.6□□□□□ -2.15
Col17a1Q07563 Snord14a-201ENSMUST00000082807 87 ntBASIC1.6□□□□□ -2.15
Col17a1Q07563 Mir223-201ENSMUST00000102112 110 ntBASIC1.59□□□□□ -2.15
Col17a1Q07563 Mir216b-201ENSMUST00000102363 86 ntBASIC1.59□□□□□ -2.15
Col17a1Q07563 Gm26259-201ENSMUST00000104778 97 ntBASIC1.59□□□□□ -2.15
Col17a1Q07563 Gm24476-201ENSMUST00000157437 131 ntBASIC1.59□□□□□ -2.15
Col17a1Q07563 Gm22100-201ENSMUST00000157926 63 ntBASIC1.59□□□□□ -2.15
Col17a1Q07563 Mir6389-201ENSMUST00000183661 102 ntBASIC1.59□□□□□ -2.15
Col17a1Q07563 Gm44488-201ENSMUST00000199467 119 ntBASIC1.59□□□□□ -2.15
Col17a1Q07563 Gm22809-201ENSMUST00000082743 156 ntBASIC1.59□□□□□ -2.15
Col17a1Q07563 Gm24580-201ENSMUST00000103965 131 ntBASIC1.58□□□□□ -2.16
Col17a1Q07563 Gm23500-201ENSMUST00000157735 98 ntBASIC1.57□□□□□ -2.16
Col17a1Q07563 Gm24073-201ENSMUST00000158177 106 ntBASIC1.57□□□□□ -2.16
Col17a1Q07563 Mir7673-201ENSMUST00000184567 64 ntBASIC1.57□□□□□ -2.16
Col17a1Q07563 Gm24865-201ENSMUST00000103246 96 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm23531-201ENSMUST00000104567 68 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm22717-201ENSMUST00000122703 171 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm25010-201ENSMUST00000158403 65 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm24218-201ENSMUST00000180163 105 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm36956-201ENSMUST00000193830 214 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm25650-201ENSMUST00000083784 162 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm23961-201ENSMUST00000104685 97 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm22030-201ENSMUST00000116942 63 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Snord2-201ENSMUST00000157899 69 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm23419-201ENSMUST00000175523 84 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm27937-201ENSMUST00000183605 88 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm22980-201ENSMUST00000082608 70 ntBASIC1.56□□□□□ -2.16
Col17a1Q07563 Gm24996-201ENSMUST00000158390 99 ntBASIC1.55□□□□□ -2.16
Col17a1Q07563 Gm43944-201ENSMUST00000205220 120 ntBASIC1.55□□□□□ -2.16
Col17a1Q07563 Gm44948-201ENSMUST00000209050 149 ntBASIC1.55□□□□□ -2.16
Col17a1Q07563 Gm25110-201ENSMUST00000116684 121 ntBASIC1.54□□□□□ -2.16
Col17a1Q07563 Gm25775-201ENSMUST00000116716 121 ntBASIC1.54□□□□□ -2.16
Col17a1Q07563 Gm24795-201ENSMUST00000116737 121 ntBASIC1.54□□□□□ -2.16
Col17a1Q07563 Gm25171-201ENSMUST00000116926 121 ntBASIC1.54□□□□□ -2.16
Col17a1Q07563 Gm22965-201ENSMUST00000157958 101 ntBASIC1.54□□□□□ -2.16
Col17a1Q07563 Gm23100-201ENSMUST00000083455 141 ntBASIC1.54□□□□□ -2.16
Col17a1Q07563 Gm24259-201ENSMUST00000083740 107 ntBASIC1.54□□□□□ -2.16
Col17a1Q07563 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
Col17a1Q07563 Gm22786-201ENSMUST00000104086 122 ntBASIC1.53□□□□□ -2.16
Col17a1Q07563 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.53□□□□□ -2.16
Col17a1Q07563 Gm24723-201ENSMUST00000158233 132 ntBASIC1.53□□□□□ -2.16
Col17a1Q07563 Gm25035-201ENSMUST00000175414 77 ntBASIC1.53□□□□□ -2.16
Col17a1Q07563 Gm24797-201ENSMUST00000178103 107 ntBASIC1.53□□□□□ -2.16
Col17a1Q07563 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col17a1Q07563 Gm23172-201ENSMUST00000157160 124 ntBASIC1.52□□□□□ -2.17
Col17a1Q07563 Gm26363-201ENSMUST00000158866 83 ntBASIC1.52□□□□□ -2.17
Col17a1Q07563 Gm24262-201ENSMUST00000157431 144 ntBASIC1.51□□□□□ -2.17
Col17a1Q07563 Gm23106-201ENSMUST00000157554 101 ntBASIC1.51□□□□□ -2.17
Col17a1Q07563 Gm25440-201ENSMUST00000158279 154 ntBASIC1.51□□□□□ -2.17
Col17a1Q07563 Gm22801-201ENSMUST00000175624 84 ntBASIC1.51□□□□□ -2.17
Col17a1Q07563 Mir468-201ENSMUST00000197332 78 ntBASIC1.51□□□□□ -2.17
Col17a1Q07563 Gm26306-201ENSMUST00000157773 119 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Mir3109-201ENSMUST00000175301 88 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Gm26285-201ENSMUST00000177923 107 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Gm27993-201ENSMUST00000184362 85 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Gm23622-201ENSMUST00000082460 107 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Gm24494-201ENSMUST00000083804 81 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Gm22559-201ENSMUST00000157329 134 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Gm24508-201ENSMUST00000180104 107 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Gm27980-201ENSMUST00000184094 169 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Mir376b-201ENSMUST00000195930 82 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Mir7231-201ENSMUST00000196252 61 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Gm44384-201ENSMUST00000200208 114 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Gm22459-201ENSMUST00000082577 108 ntBASIC1.5□□□□□ -2.17
Col17a1Q07563 Mir544-201ENSMUST00000103813 78 ntBASIC1.48□□□□□ -2.17
Col17a1Q07563 Mir669h-201ENSMUST00000116944 125 ntBASIC1.48□□□□□ -2.17
Col17a1Q07563 Gm25087-201ENSMUST00000101992 78 ntBASIC1.47□□□□□ -2.17
Col17a1Q07563 Gm24377-201ENSMUST00000104398 131 ntBASIC1.47□□□□□ -2.17
Col17a1Q07563 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
Col17a1Q07563 Gm22485-201ENSMUST00000157990 109 ntBASIC1.47□□□□□ -2.17
Col17a1Q07563 Gm23114-201ENSMUST00000158478 117 ntBASIC1.47□□□□□ -2.17
Col17a1Q07563 Gm26467-201ENSMUST00000097257 78 ntBASIC1.47□□□□□ -2.17
Col17a1Q07563 Gm22595-201ENSMUST00000104250 130 ntBASIC1.46□□□□□ -2.18
Col17a1Q07563 Mir466m-201ENSMUST00000175052 84 ntBASIC1.46□□□□□ -2.18
Col17a1Q07563 Snord1a-201ENSMUST00000083160 74 ntBASIC1.45□□□□□ -2.18
Col17a1Q07563 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
Col17a1Q07563 Gm23301-201ENSMUST00000082713 65 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms