Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm25497-201ENSMUST00000104425 132 ntBASIC1,34□□□□□ -2,19
Sox1P53783 Gm23989-201ENSMUST00000117030 66 ntBASIC1,34□□□□□ -2,19
Sox1P53783 Gm11966-201ENSMUST00000119907 87 ntBASIC1,34□□□□□ -2,19
Sox1P53783 Gm27717-201ENSMUST00000183933 151 ntBASIC1,34□□□□□ -2,19
Sox1P53783 Gm27607-201ENSMUST00000185162 122 ntBASIC1,34□□□□□ -2,19
Sox1P53783 AC147560.1-201ENSMUST00000197528 107 ntBASIC1,34□□□□□ -2,19
Sox1P53783 Gm23785-201ENSMUST00000116741 96 ntBASIC1,33□□□□□ -2,2
Sox1P53783 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,33□□□□□ -2,2
Sox1P53783 Gm42533-201ENSMUST00000196247 157 ntBASIC1,33□□□□□ -2,2
Sox1P53783 Mir126a-201ENSMUST00000083606 73 ntBASIC1,33□□□□□ -2,2
Sox1P53783 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1,32□□□□□ -2,2
Sox1P53783 Gm25495-201ENSMUST00000104431 131 ntBASIC1,32□□□□□ -2,2
Sox1P53783 Gm24555-201ENSMUST00000104548 124 ntBASIC1,32□□□□□ -2,2
Sox1P53783 Mir5124a-201ENSMUST00000175528 72 ntBASIC1,32□□□□□ -2,2
Sox1P53783 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1,32□□□□□ -2,2
Sox1P53783 Mir741-201ENSMUST00000103931 71 ntBASIC1,31□□□□□ -2,2
Sox1P53783 Gm24895-201ENSMUST00000122742 74 ntBASIC1,31□□□□□ -2,2
Sox1P53783 Gm5581-201ENSMUST00000072940 2550 ntBASIC1,31□□□□□ -2,2
Sox1P53783 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1,3□□□□□ -2,2
Sox1P53783 Gm23477-201ENSMUST00000158882 128 ntBASIC1,3□□□□□ -2,2
Sox1P53783 Mir3064-201ENSMUST00000175532 67 ntBASIC1,3□□□□□ -2,2
Sox1P53783 Gm27265-201ENSMUST00000183559 77 ntBASIC1,3□□□□□ -2,2
Sox1P53783 Mir211-201ENSMUST00000083651 106 ntBASIC1,3□□□□□ -2,2
Sox1P53783 Gm24233-201ENSMUST00000104317 122 ntBASIC1,29□□□□□ -2,2
Sox1P53783 Snord13-201ENSMUST00000157627 104 ntBASIC1,29□□□□□ -2,2
Sox1P53783 Gm24500-201ENSMUST00000158447 124 ntBASIC1,29□□□□□ -2,2
Sox1P53783 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,29□□□□□ -2,2
Sox1P53783 Gm24580-201ENSMUST00000103965 131 ntBASIC1,28□□□□□ -2,2
Sox1P53783 Gm23321-201ENSMUST00000104465 126 ntBASIC1,28□□□□□ -2,2
Sox1P53783 Gm11857-201ENSMUST00000119817 324 ntBASIC1,28□□□□□ -2,2
Sox1P53783 Gm23221-201ENSMUST00000158118 93 ntBASIC1,28□□□□□ -2,2
Sox1P53783 Gm23416-201ENSMUST00000175520 95 ntBASIC1,28□□□□□ -2,2
Sox1P53783 Gm44211-201ENSMUST00000204867 145 ntBASIC1,28□□□□□ -2,2
Sox1P53783 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,28□□□□□ -2,2
Sox1P53783 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1,27□□□□□ -2,21
Sox1P53783 Gm23012-201ENSMUST00000104149 83 ntBASIC1,27□□□□□ -2,21
Sox1P53783 Gm25328-201ENSMUST00000175013 107 ntBASIC1,27□□□□□ -2,21
Sox1P53783 AC160550.1-201ENSMUST00000228659 181 ntBASIC1,27□□□□□ -2,21
Sox1P53783 Mir15a-201ENSMUST00000175266 84 ntBASIC1,26□□□□□ -2,21
Sox1P53783 Gm25300-201ENSMUST00000175284 84 ntBASIC1,26□□□□□ -2,21
Sox1P53783 Mir7010-201ENSMUST00000183464 63 ntBASIC1,26□□□□□ -2,21
Sox1P53783 Gm29432-201ENSMUST00000185397 139 ntBASIC1,26□□□□□ -2,21
Sox1P53783 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1,26□□□□□ -2,21
Sox1P53783 n-R5s6-201ENSMUST00000122663 88 ntBASIC1,25□□□□□ -2,21
Sox1P53783 Gm27549-201ENSMUST00000183508 62 ntBASIC1,25□□□□□ -2,21
Sox1P53783 Gm45655-201ENSMUST00000211625 160 ntBASIC1,25□□□□□ -2,21
Sox1P53783 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1,24□□□□□ -2,21
Sox1P53783 Gm24467-201ENSMUST00000157887 126 ntBASIC1,24□□□□□ -2,21
Sox1P53783 Gm22520-201ENSMUST00000158269 129 ntBASIC1,24□□□□□ -2,21
Sox1P53783 Mir3108-201ENSMUST00000175500 79 ntBASIC1,24□□□□□ -2,21
Sox1P53783 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1,24□□□□□ -2,21
Sox1P53783 Gm25138-201ENSMUST00000083248 136 ntBASIC1,24□□□□□ -2,21
Sox1P53783 Mir27b-201ENSMUST00000083541 73 ntBASIC1,24□□□□□ -2,21
Sox1P53783 Mir669h-201ENSMUST00000116944 125 ntBASIC1,23□□□□□ -2,21
Sox1P53783 Gm23893-201ENSMUST00000158106 134 ntBASIC1,23□□□□□ -2,21
Sox1P53783 Snord95-201ENSMUST00000082846 68 ntBASIC1,23□□□□□ -2,21
Sox1P53783 Gm22048-201ENSMUST00000104721 89 ntBASIC1,22□□□□□ -2,21
Sox1P53783 Gm24772-201ENSMUST00000158507 110 ntBASIC1,22□□□□□ -2,21
Sox1P53783 Mir101a-201ENSMUST00000083517 83 ntBASIC1,22□□□□□ -2,21
Sox1P53783 Gm23245-201ENSMUST00000083370 135 ntBASIC1,21□□□□□ -2,22
Sox1P53783 Gm22559-201ENSMUST00000157329 134 ntBASIC1,2□□□□□ -2,22
Sox1P53783 Gm23180-201ENSMUST00000158686 125 ntBASIC1,19□□□□□ -2,22
Sox1P53783 Mir3070a-201ENSMUST00000175468 89 ntBASIC1,19□□□□□ -2,22
Sox1P53783 Gm42677-201ENSMUST00000196363 127 ntBASIC1,19□□□□□ -2,22
Sox1P53783 Gm22663-201ENSMUST00000158721 102 ntBASIC1,18□□□□□ -2,22
Sox1P53783 Gm26438-201ENSMUST00000082593 107 ntBASIC1,18□□□□□ -2,22
Sox1P53783 Mir876-201ENSMUST00000104659 81 ntBASIC1,17□□□□□ -2,22
Sox1P53783 Gm44483-201ENSMUST00000197203 97 ntBASIC1,17□□□□□ -2,22
Sox1P53783 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1,17□□□□□ -2,22
Sox1P53783 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,17□□□□□ -2,22
Sox1P53783 Mir669f-201ENSMUST00000103850 121 ntBASIC1,16□□□□□ -2,22
Sox1P53783 Gm25656-201ENSMUST00000158466 66 ntBASIC1,16□□□□□ -2,22
Sox1P53783 Gm27974-201ENSMUST00000183415 105 ntBASIC1,16□□□□□ -2,22
Sox1P53783 Snord45b-201ENSMUST00000082797 71 ntBASIC1,16□□□□□ -2,22
Sox1P53783 Gm25375-201ENSMUST00000158157 135 ntBASIC1,15□□□□□ -2,23
Sox1P53783 Mir33-201ENSMUST00000083531 69 ntBASIC1,15□□□□□ -2,23
Sox1P53783 Gm25552-201ENSMUST00000158081 91 ntBASIC1,14□□□□□ -2,23
Sox1P53783 Gm23856-201ENSMUST00000158380 99 ntBASIC1,14□□□□□ -2,23
Sox1P53783 Gm22074-201ENSMUST00000158595 113 ntBASIC1,14□□□□□ -2,23
Sox1P53783 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,14□□□□□ -2,23
Sox1P53783 Gm24331-201ENSMUST00000175099 67 ntBASIC1,14□□□□□ -2,23
Sox1P53783 Gm25641-201ENSMUST00000175135 108 ntBASIC1,14□□□□□ -2,23
Sox1P53783 Gm23801-201ENSMUST00000175561 67 ntBASIC1,14□□□□□ -2,23
Sox1P53783 Gm24485-201ENSMUST00000178283 67 ntBASIC1,14□□□□□ -2,23
Sox1P53783 Gm27554-201ENSMUST00000185074 98 ntBASIC1,14□□□□□ -2,23
Sox1P53783 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1,14□□□□□ -2,23
Sox1P53783 Gm24865-201ENSMUST00000103246 96 ntBASIC1,13□□□□□ -2,23
Sox1P53783 Mir297-1-201ENSMUST00000103800 76 ntBASIC1,13□□□□□ -2,23
Sox1P53783 Gm27937-201ENSMUST00000183605 88 ntBASIC1,13□□□□□ -2,23
Sox1P53783 Gm27711-201ENSMUST00000183802 118 ntBASIC1,13□□□□□ -2,23
Sox1P53783 DQ267101-201ENSMUST00000082562 73 ntBASIC1,13□□□□□ -2,23
Sox1P53783 Gm25894-201ENSMUST00000083458 75 ntBASIC1,13□□□□□ -2,23
Sox1P53783 Gm14533-201ENSMUST00000117088 93 ntBASIC1,12□□□□□ -2,23
Sox1P53783 Gm24321-201ENSMUST00000175348 80 ntBASIC1,12□□□□□ -2,23
Sox1P53783 Gm25055-201ENSMUST00000157369 76 ntBASIC1,11□□□□□ -2,23
Sox1P53783 Gm22485-201ENSMUST00000157990 109 ntBASIC1,11□□□□□ -2,23
Sox1P53783 Gm27977-201ENSMUST00000185159 111 ntBASIC1,11□□□□□ -2,23
Sox1P53783 Gm27980-201ENSMUST00000184094 169 ntBASIC1,1□□□□□ -2,23
Sox1P53783 Gm27943-201ENSMUST00000184844 116 ntBASIC1,1□□□□□ -2,23
Sox1P53783 Mir494-201ENSMUST00000093632 85 ntBASIC1,1□□□□□ -2,23
Retrieved 100 of 76,532 protein–RNA pairs in 91,7 ms