Protein–RNA interactions for Protein: P50220
Nkx2-1, Homeobox protein Nkx-2.1, mouse
Protein |
RNA |
Prediction (catRAPID) |
Interaction (Experimental data) |
Gene |
UniProt Accession |
Transcript Symbol |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
p-Value |
Fold Change |
Nkx2-1 | P50220 | Gm24202-201 | ENSMUST00000082948 | 103 nt | BASIC | 0,64 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mirlet7a-1-201 | ENSMUST00000083487 | 94 nt | BASIC | 0,64 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir196b-201 | ENSMUST00000083509 | 85 nt | BASIC | 0,64 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm22720-201 | ENSMUST00000122710 | 87 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm25552-201 | ENSMUST00000158081 | 91 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm23410-201 | ENSMUST00000179967 | 107 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir8116-201 | ENSMUST00000184134 | 97 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir7673-201 | ENSMUST00000184567 | 64 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir376b-201 | ENSMUST00000195930 | 82 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm22505-201 | ENSMUST00000082956 | 108 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm22363-201 | ENSMUST00000083100 | 108 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm25705-201 | ENSMUST00000083119 | 104 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm23814-201 | ENSMUST00000083230 | 102 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir377-201 | ENSMUST00000083504 | 68 nt | BASIC | 0,63 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm25378-201 | ENSMUST00000104333 | 129 nt | BASIC | 0,62 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm6985-201 | ENSMUST00000121255 | 271 nt | BASIC | 0,62 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Snord2-201 | ENSMUST00000157899 | 69 nt | BASIC | 0,62 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm25715-201 | ENSMUST00000158627 | 125 nt | BASIC | 0,62 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm24549-201 | ENSMUST00000158647 | 139 nt | BASIC | 0,62 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir100-201 | ENSMUST00000175270 | 80 nt | BASIC | 0,62 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir7663-201 | ENSMUST00000183950 | 61 nt | BASIC | 0,62 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir7052-201 | ENSMUST00000184821 | 65 nt | BASIC | 0,62 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm25991-201 | ENSMUST00000102439 | 99 nt | BASIC | 0,61 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm23766-201 | ENSMUST00000103894 | 80 nt | BASIC | 0,61 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm23853-201 | ENSMUST00000158375 | 104 nt | BASIC | 0,61 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm23735-201 | ENSMUST00000082551 | 134 nt | BASIC | 0,61 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm26438-201 | ENSMUST00000082593 | 107 nt | BASIC | 0,61 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm25798-201 | ENSMUST00000082641 | 107 nt | BASIC | 0,61 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm24201-201 | ENSMUST00000082946 | 125 nt | BASIC | 0,61 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm25629-201 | ENSMUST00000084001 | 107 nt | BASIC | 0,61 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Olfr1099-202 | ENSMUST00000213456 | 4867 nt | APPRIS P1 TSL 5 BASIC | 0,61 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Snord71-201 | ENSMUST00000104361 | 85 nt | BASIC | 0,6 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm22520-201 | ENSMUST00000158269 | 129 nt | BASIC | 0,6 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm22087-201 | ENSMUST00000158339 | 88 nt | BASIC | 0,6 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir6364-201 | ENSMUST00000183396 | 86 nt | BASIC | 0,6 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm27993-201 | ENSMUST00000184362 | 85 nt | BASIC | 0,6 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm29432-201 | ENSMUST00000185397 | 139 nt | BASIC | 0,6 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Svbp-204 | ENSMUST00000210595 | 150 nt | TSL 5 BASIC | 0,6 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir448-201 | ENSMUST00000083516 | 112 nt | BASIC | 0,6 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir297-1-201 | ENSMUST00000103800 | 76 nt | BASIC | 0,59 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm25609-201 | ENSMUST00000104019 | 104 nt | BASIC | 0,59 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm23012-201 | ENSMUST00000104149 | 83 nt | BASIC | 0,59 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm23477-201 | ENSMUST00000158882 | 128 nt | BASIC | 0,59 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir3968-201 | ENSMUST00000175355 | 100 nt | BASIC | 0,59 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | AC211878.4-201 | ENSMUST00000220970 | 262 nt | BASIC | 0,59 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm6293-201 | ENSMUST00000050339 | 195 nt | BASIC | 0,59 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Snord33-201 | ENSMUST00000083694 | 84 nt | BASIC | 0,59 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Mir3071-201 | ENSMUST00000093621 | 80 nt | BASIC | 0,59 | □□□□□ -2,31 | | |
Nkx2-1 | P50220 | Gm8251-201 | ENSMUST00000168641 | 5985 nt | APPRIS P1 BASIC | 0,58 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm25040-201 | ENSMUST00000103877 | 66 nt | BASIC | 0,58 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm25506-201 | ENSMUST00000104339 | 70 nt | BASIC | 0,58 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm22466-201 | ENSMUST00000175278 | 69 nt | BASIC | 0,58 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir1954-201 | ENSMUST00000175595 | 86 nt | BASIC | 0,58 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm44211-201 | ENSMUST00000204867 | 145 nt | BASIC | 0,58 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm43944-201 | ENSMUST00000205220 | 120 nt | BASIC | 0,58 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm25894-201 | ENSMUST00000083458 | 75 nt | BASIC | 0,58 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir30a-201 | ENSMUST00000083471 | 71 nt | BASIC | 0,58 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm12432-201 | ENSMUST00000119540 | 186 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm6272-201 | ENSMUST00000121256 | 171 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm22541-201 | ENSMUST00000158165 | 127 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm24725-201 | ENSMUST00000158229 | 125 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm23072-201 | ENSMUST00000158243 | 123 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir6389-201 | ENSMUST00000183661 | 102 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm27656-201 | ENSMUST00000185055 | 80 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir1949-202 | ENSMUST00000199259 | 70 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm22459-201 | ENSMUST00000082577 | 108 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Snord45b-201 | ENSMUST00000082797 | 71 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm25138-201 | ENSMUST00000083248 | 136 nt | BASIC | 0,57 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm25055-201 | ENSMUST00000157369 | 76 nt | BASIC | 0,56 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir3109-201 | ENSMUST00000175301 | 88 nt | BASIC | 0,56 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir3070a-201 | ENSMUST00000175468 | 89 nt | BASIC | 0,56 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm45655-201 | ENSMUST00000211625 | 160 nt | BASIC | 0,56 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm24579-201 | ENSMUST00000103964 | 144 nt | BASIC | 0,55 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm22673-201 | ENSMUST00000104415 | 131 nt | BASIC | 0,55 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm24288-201 | ENSMUST00000157630 | 144 nt | BASIC | 0,55 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm25183-201 | ENSMUST00000157752 | 106 nt | BASIC | 0,55 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm23416-201 | ENSMUST00000175520 | 95 nt | BASIC | 0,55 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm23301-201 | ENSMUST00000082713 | 65 nt | BASIC | 0,55 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm24612-201 | ENSMUST00000083267 | 107 nt | BASIC | 0,55 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir487b-201 | ENSMUST00000102265 | 82 nt | BASIC | 0,54 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm24233-201 | ENSMUST00000104317 | 122 nt | BASIC | 0,54 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm24396-201 | ENSMUST00000116905 | 93 nt | BASIC | 0,54 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm23989-201 | ENSMUST00000117030 | 66 nt | BASIC | 0,54 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm21954-201 | ENSMUST00000179544 | 51 nt | APPRIS P1 TSL 5 BASIC | 0,54 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm42845-201 | ENSMUST00000197766 | 105 nt | BASIC | 0,54 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | CT030170.1-201 | ENSMUST00000222183 | 148 nt | BASIC | 0,54 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Snord95-201 | ENSMUST00000082846 | 68 nt | BASIC | 0,54 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir216a-201 | ENSMUST00000083605 | 72 nt | BASIC | 0,54 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm23708-201 | ENSMUST00000104367 | 123 nt | BASIC | 0,53 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm26301-201 | ENSMUST00000104813 | 95 nt | BASIC | 0,53 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm24379-201 | ENSMUST00000122695 | 86 nt | BASIC | 0,53 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm24963-201 | ENSMUST00000157916 | 144 nt | BASIC | 0,53 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm22165-201 | ENSMUST00000158414 | 103 nt | BASIC | 0,53 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm26007-201 | ENSMUST00000158798 | 120 nt | BASIC | 0,53 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm27937-201 | ENSMUST00000183605 | 88 nt | BASIC | 0,53 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir200b-201 | ENSMUST00000083615 | 70 nt | BASIC | 0,53 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Mir15b-201 | ENSMUST00000083646 | 64 nt | BASIC | 0,53 | □□□□□ -2,32 | | |
Nkx2-1 | P50220 | Gm25170-201 | ENSMUST00000104191 | 129 nt | BASIC | 0,52 | □□□□□ -2,33 | | |
Nkx2-1 | P50220 | Gm25496-201 | ENSMUST00000104430 | 120 nt | BASIC | 0,52 | □□□□□ -2,33 | | |
Nkx2-1 | P50220 | Gm27450-201 | ENSMUST00000104632 | 90 nt | BASIC | 0,52 | □□□□□ -2,33 | | |
Retrieved 100 of 76,532 protein–RNA pairs in 93,9 ms