Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Snord87-201ENSMUST00000175437 87 ntBASIC1.58□□□□□ -2.16
Col18a1P39061 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Col18a1P39061 Gm6607-201ENSMUST00000215035 328 ntBASIC1.58□□□□□ -2.16
Col18a1P39061 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Col18a1P39061 Gm24400-201ENSMUST00000157865 107 ntBASIC1.57□□□□□ -2.16
Col18a1P39061 Mir3086-201ENSMUST00000175072 87 ntBASIC1.57□□□□□ -2.16
Col18a1P39061 Gm44488-201ENSMUST00000199467 119 ntBASIC1.57□□□□□ -2.16
Col18a1P39061 Snord43-201ENSMUST00000199549 108 ntBASIC1.57□□□□□ -2.16
Col18a1P39061 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.57□□□□□ -2.16
Col18a1P39061 Gm38274-201ENSMUST00000195689 148 ntBASIC1.57□□□□□ -2.16
Col18a1P39061 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.57□□□□□ -2.16
Col18a1P39061 Snord95-201ENSMUST00000082846 68 ntBASIC1.57□□□□□ -2.16
Col18a1P39061 Gm25522-201ENSMUST00000158394 105 ntBASIC1.56□□□□□ -2.16
Col18a1P39061 Gm22801-201ENSMUST00000175624 84 ntBASIC1.56□□□□□ -2.16
Col18a1P39061 Gm25650-201ENSMUST00000083784 162 ntBASIC1.56□□□□□ -2.16
Col18a1P39061 Gm23126-201ENSMUST00000104260 134 ntBASIC1.55□□□□□ -2.16
Col18a1P39061 Mir669h-201ENSMUST00000116944 125 ntBASIC1.55□□□□□ -2.16
Col18a1P39061 Gm22340-201ENSMUST00000157717 114 ntBASIC1.55□□□□□ -2.16
Col18a1P39061 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.55□□□□□ -2.16
Col18a1P39061 Gm23483-201ENSMUST00000104179 108 ntBASIC1.54□□□□□ -2.16
Col18a1P39061 Gm22663-201ENSMUST00000158721 102 ntBASIC1.54□□□□□ -2.16
Col18a1P39061 Gm22301-201ENSMUST00000082656 107 ntBASIC1.54□□□□□ -2.16
Col18a1P39061 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.54□□□□□ -2.16
Col18a1P39061 Mir3061-201ENSMUST00000175129 91 ntBASIC1.54□□□□□ -2.16
Col18a1P39061 Snord57-201ENSMUST00000083338 72 ntBASIC1.54□□□□□ -2.16
Col18a1P39061 Mir151-201ENSMUST00000083678 68 ntBASIC1.54□□□□□ -2.16
Col18a1P39061 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col18a1P39061 Mir7079-201ENSMUST00000184697 69 ntBASIC1.53□□□□□ -2.16
Col18a1P39061 Gm42677-201ENSMUST00000196363 127 ntBASIC1.53□□□□□ -2.16
Col18a1P39061 Mir22-201ENSMUST00000083595 95 ntBASIC1.53□□□□□ -2.16
Col18a1P39061 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.52□□□□□ -2.17
Col18a1P39061 Gm23301-201ENSMUST00000082713 65 ntBASIC1.52□□□□□ -2.17
Col18a1P39061 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.52□□□□□ -2.17
Col18a1P39061 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
Col18a1P39061 Gm13577-201ENSMUST00000121365 205 ntBASIC1.51□□□□□ -2.17
Col18a1P39061 Gm24476-201ENSMUST00000157437 131 ntBASIC1.51□□□□□ -2.17
Col18a1P39061 Gm23590-201ENSMUST00000157661 104 ntBASIC1.51□□□□□ -2.17
Col18a1P39061 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Col18a1P39061 Gm25326-201ENSMUST00000101903 107 ntBASIC1.5□□□□□ -2.17
Col18a1P39061 Gm23573-201ENSMUST00000104408 107 ntBASIC1.5□□□□□ -2.17
Col18a1P39061 Gm23106-201ENSMUST00000157554 101 ntBASIC1.5□□□□□ -2.17
Col18a1P39061 Gm44948-201ENSMUST00000209050 149 ntBASIC1.5□□□□□ -2.17
Col18a1P39061 Gm24070-201ENSMUST00000104519 130 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 Gm25309-201ENSMUST00000116728 126 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 Gm25994-201ENSMUST00000175392 101 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 Mir717-201ENSMUST00000102259 109 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 Gm23787-201ENSMUST00000122538 73 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 Gm25658-201ENSMUST00000158472 128 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 Gm25368-201ENSMUST00000158847 131 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 Mir7683-201ENSMUST00000183842 61 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 Mir468-201ENSMUST00000197332 78 ntBASIC1.49□□□□□ -2.17
Col18a1P39061 Mir544-201ENSMUST00000103813 78 ntBASIC1.48□□□□□ -2.17
Col18a1P39061 Gm23012-201ENSMUST00000104149 83 ntBASIC1.48□□□□□ -2.17
Col18a1P39061 Gm24297-201ENSMUST00000158300 68 ntBASIC1.48□□□□□ -2.17
Col18a1P39061 Snord14a-201ENSMUST00000082807 87 ntBASIC1.48□□□□□ -2.17
Col18a1P39061 Mir93-201ENSMUST00000083593 88 ntBASIC1.48□□□□□ -2.17
Col18a1P39061 Mir1949-201ENSMUST00000157434 141 ntBASIC1.47□□□□□ -2.17
Col18a1P39061 Gm25247-201ENSMUST00000175475 90 ntBASIC1.47□□□□□ -2.17
Col18a1P39061 Gm25730-201ENSMUST00000178753 165 ntBASIC1.47□□□□□ -2.17
Col18a1P39061 Gm43944-201ENSMUST00000205220 120 ntBASIC1.47□□□□□ -2.17
Col18a1P39061 Gm23469-201ENSMUST00000157131 104 ntBASIC1.47□□□□□ -2.17
Col18a1P39061 Gm23419-201ENSMUST00000175523 84 ntBASIC1.47□□□□□ -2.17
Col18a1P39061 Gm45125-201ENSMUST00000206908 151 ntBASIC1.47□□□□□ -2.17
Col18a1P39061 Gm26438-201ENSMUST00000082593 107 ntBASIC1.47□□□□□ -2.17
Col18a1P39061 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Col18a1P39061 Gm25497-201ENSMUST00000104425 132 ntBASIC1.46□□□□□ -2.18
Col18a1P39061 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC1.46□□□□□ -2.18
Col18a1P39061 Gm24895-201ENSMUST00000122742 74 ntBASIC1.46□□□□□ -2.18
Col18a1P39061 Gm22357-201ENSMUST00000082882 83 ntBASIC1.46□□□□□ -2.18
Col18a1P39061 Gm22652-201ENSMUST00000083207 131 ntBASIC1.46□□□□□ -2.18
Col18a1P39061 Gm23114-201ENSMUST00000158478 117 ntBASIC1.45□□□□□ -2.18
Col18a1P39061 Gm22980-201ENSMUST00000082608 70 ntBASIC1.45□□□□□ -2.18
Col18a1P39061 Mir300-201ENSMUST00000083485 79 ntBASIC1.45□□□□□ -2.18
Col18a1P39061 Gm14533-201ENSMUST00000117088 93 ntBASIC1.44□□□□□ -2.18
Col18a1P39061 Gm24229-201ENSMUST00000158830 118 ntBASIC1.44□□□□□ -2.18
Col18a1P39061 Mir27b-201ENSMUST00000083541 73 ntBASIC1.44□□□□□ -2.18
Col18a1P39061 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col18a1P39061 Mir377-201ENSMUST00000083504 68 ntBASIC1.44□□□□□ -2.18
Col18a1P39061 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.43□□□□□ -2.18
Col18a1P39061 Mir100-201ENSMUST00000175270 80 ntBASIC1.42□□□□□ -2.18
Col18a1P39061 Mir30a-201ENSMUST00000083471 71 ntBASIC1.42□□□□□ -2.18
Col18a1P39061 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col18a1P39061 Gm26338-201ENSMUST00000102372 110 ntBASIC1.42□□□□□ -2.18
Col18a1P39061 Gm22550-201ENSMUST00000179774 107 ntBASIC1.42□□□□□ -2.18
Col18a1P39061 Gm22060-201ENSMUST00000082558 107 ntBASIC1.42□□□□□ -2.18
Col18a1P39061 Gm25132-201ENSMUST00000082652 107 ntBASIC1.42□□□□□ -2.18
Col18a1P39061 Gm22302-201ENSMUST00000082657 106 ntBASIC1.42□□□□□ -2.18
Col18a1P39061 Mir6342-201ENSMUST00000183870 125 ntBASIC1.41□□□□□ -2.18
Col18a1P39061 Gm44211-201ENSMUST00000204867 145 ntBASIC1.41□□□□□ -2.18
Col18a1P39061 Snord1a-201ENSMUST00000083160 74 ntBASIC1.41□□□□□ -2.18
Col18a1P39061 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col18a1P39061 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.4□□□□□ -2.18
Col18a1P39061 Gm22603-201ENSMUST00000157603 96 ntBASIC1.4□□□□□ -2.19
Col18a1P39061 Gm27265-201ENSMUST00000183559 77 ntBASIC1.4□□□□□ -2.19
Col18a1P39061 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.4□□□□□ -2.19
Col18a1P39061 Gm23100-201ENSMUST00000083455 141 ntBASIC1.39□□□□□ -2.19
Col18a1P39061 Gm25495-201ENSMUST00000104431 131 ntBASIC1.39□□□□□ -2.19
Col18a1P39061 Gm24549-201ENSMUST00000158647 139 ntBASIC1.39□□□□□ -2.19
Col18a1P39061 Gm23339-201ENSMUST00000158962 139 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 274.3 ms