Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm25886-201ENSMUST00000157780 114 ntBASIC1.55□□□□□ -2.16
Hoxd9P28357 Gm22595-201ENSMUST00000104250 130 ntBASIC1.54□□□□□ -2.16
Hoxd9P28357 Gm24400-201ENSMUST00000157865 107 ntBASIC1.54□□□□□ -2.16
Hoxd9P28357 Gm22164-201ENSMUST00000158413 106 ntBASIC1.54□□□□□ -2.16
Hoxd9P28357 Gm25161-201ENSMUST00000158913 132 ntBASIC1.54□□□□□ -2.16
Hoxd9P28357 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.54□□□□□ -2.16
Hoxd9P28357 Mir6351-201ENSMUST00000183826 99 ntBASIC1.54□□□□□ -2.16
Hoxd9P28357 Mir6985-201ENSMUST00000184641 61 ntBASIC1.54□□□□□ -2.16
Hoxd9P28357 Snord69-201ENSMUST00000104024 80 ntBASIC1.53□□□□□ -2.16
Hoxd9P28357 Gm25787-201ENSMUST00000104709 92 ntBASIC1.53□□□□□ -2.16
Hoxd9P28357 Gm26181-201ENSMUST00000157687 106 ntBASIC1.53□□□□□ -2.16
Hoxd9P28357 Gm24797-201ENSMUST00000178103 107 ntBASIC1.53□□□□□ -2.16
Hoxd9P28357 Mir1949-202ENSMUST00000199259 70 ntBASIC1.53□□□□□ -2.16
Hoxd9P28357 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Hoxd9P28357 Gm14533-201ENSMUST00000117088 93 ntBASIC1.52□□□□□ -2.17
Hoxd9P28357 Mir6240-201ENSMUST00000184281 117 ntBASIC1.52□□□□□ -2.17
Hoxd9P28357 Gm28794-201ENSMUST00000185276 136 ntBASIC1.52□□□□□ -2.17
Hoxd9P28357 Mir7231-201ENSMUST00000196252 61 ntBASIC1.52□□□□□ -2.17
Hoxd9P28357 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.52□□□□□ -2.17
Hoxd9P28357 Gm26438-201ENSMUST00000082593 107 ntBASIC1.52□□□□□ -2.17
Hoxd9P28357 Gm23708-201ENSMUST00000104367 123 ntBASIC1.51□□□□□ -2.17
Hoxd9P28357 Gm24070-201ENSMUST00000104519 130 ntBASIC1.51□□□□□ -2.17
Hoxd9P28357 Gm24174-201ENSMUST00000158933 111 ntBASIC1.51□□□□□ -2.17
Hoxd9P28357 Gm27420-201ENSMUST00000183823 79 ntBASIC1.51□□□□□ -2.17
Hoxd9P28357 Gm27248-201ENSMUST00000184004 166 ntBASIC1.51□□□□□ -2.17
Hoxd9P28357 Gm24262-201ENSMUST00000157431 144 ntBASIC1.5□□□□□ -2.17
Hoxd9P28357 Gm25656-201ENSMUST00000158466 66 ntBASIC1.5□□□□□ -2.17
Hoxd9P28357 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.5□□□□□ -2.17
Hoxd9P28357 Gm23036-201ENSMUST00000157885 99 ntBASIC1.49□□□□□ -2.17
Hoxd9P28357 Gm24723-201ENSMUST00000158233 132 ntBASIC1.49□□□□□ -2.17
Hoxd9P28357 Gm26491-201ENSMUST00000179268 121 ntBASIC1.49□□□□□ -2.17
Hoxd9P28357 Gm24508-201ENSMUST00000180104 107 ntBASIC1.49□□□□□ -2.17
Hoxd9P28357 Mir7665-201ENSMUST00000184907 63 ntBASIC1.49□□□□□ -2.17
Hoxd9P28357 Gm25802-201ENSMUST00000082639 77 ntBASIC1.49□□□□□ -2.17
Hoxd9P28357 Snord96a-201ENSMUST00000082791 81 ntBASIC1.49□□□□□ -2.17
Hoxd9P28357 Gm6272-201ENSMUST00000121256 171 ntBASIC1.48□□□□□ -2.17
Hoxd9P28357 Gm42506-201ENSMUST00000202009 150 ntBASIC1.48□□□□□ -2.17
Hoxd9P28357 Mir3071-201ENSMUST00000093621 80 ntBASIC1.48□□□□□ -2.17
Hoxd9P28357 Gm24233-201ENSMUST00000104317 122 ntBASIC1.47□□□□□ -2.17
Hoxd9P28357 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.47□□□□□ -2.17
Hoxd9P28357 Mir320-201ENSMUST00000083594 82 ntBASIC1.47□□□□□ -2.17
Hoxd9P28357 Gm24445-201ENSMUST00000083981 107 ntBASIC1.47□□□□□ -2.17
Hoxd9P28357 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Hoxd9P28357 Gm26301-201ENSMUST00000104813 95 ntBASIC1.46□□□□□ -2.18
Hoxd9P28357 Gm25936-201ENSMUST00000179952 114 ntBASIC1.46□□□□□ -2.18
Hoxd9P28357 Gm44458-201ENSMUST00000196594 143 ntBASIC1.46□□□□□ -2.18
Hoxd9P28357 Gm26224-201ENSMUST00000082506 80 ntBASIC1.46□□□□□ -2.18
Hoxd9P28357 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Hoxd9P28357 Mir500-201ENSMUST00000093600 92 ntBASIC1.45□□□□□ -2.18
Hoxd9P28357 Snord71-201ENSMUST00000104361 85 ntBASIC1.44□□□□□ -2.18
Hoxd9P28357 Gm25541-201ENSMUST00000116888 126 ntBASIC1.44□□□□□ -2.18
Hoxd9P28357 Gm25968-201ENSMUST00000157167 100 ntBASIC1.44□□□□□ -2.18
Hoxd9P28357 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.44□□□□□ -2.18
Hoxd9P28357 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Hoxd9P28357 Gm25309-201ENSMUST00000116728 126 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Gm15115-201ENSMUST00000121145 264 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Gm25055-201ENSMUST00000157369 76 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Gm26007-201ENSMUST00000158798 120 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Gm25831-201ENSMUST00000158924 163 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Gm23340-201ENSMUST00000158955 123 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Gm24218-201ENSMUST00000180163 105 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Mir7052-201ENSMUST00000184821 65 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Gm27656-201ENSMUST00000185055 80 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Gm38323-201ENSMUST00000192450 210 ntBASIC1.43□□□□□ -2.18
Hoxd9P28357 Mir653-201ENSMUST00000102402 85 ntBASIC1.42□□□□□ -2.18
Hoxd9P28357 Gm25715-201ENSMUST00000158627 125 ntBASIC1.42□□□□□ -2.18
Hoxd9P28357 Gm45125-201ENSMUST00000206908 151 ntBASIC1.42□□□□□ -2.18
Hoxd9P28357 Gm25087-201ENSMUST00000101992 78 ntBASIC1.41□□□□□ -2.18
Hoxd9P28357 Gm26259-201ENSMUST00000104778 97 ntBASIC1.41□□□□□ -2.18
Hoxd9P28357 Gm44962-201ENSMUST00000206460 279 ntBASIC1.41□□□□□ -2.18
Hoxd9P28357 Gm26467-201ENSMUST00000097257 78 ntBASIC1.41□□□□□ -2.18
Hoxd9P28357 Gm24271-201ENSMUST00000102327 111 ntBASIC1.4□□□□□ -2.19
Hoxd9P28357 Gm23989-201ENSMUST00000117030 66 ntBASIC1.4□□□□□ -2.19
Hoxd9P28357 Gm24902-201ENSMUST00000158126 123 ntBASIC1.4□□□□□ -2.19
Hoxd9P28357 Gm22016-201ENSMUST00000158793 114 ntBASIC1.4□□□□□ -2.19
Hoxd9P28357 Gm24710-201ENSMUST00000175235 101 ntBASIC1.4□□□□□ -2.19
Hoxd9P28357 Mir3079-201ENSMUST00000175428 90 ntBASIC1.4□□□□□ -2.19
Hoxd9P28357 Gm24135-201ENSMUST00000179085 101 ntBASIC1.4□□□□□ -2.19
Hoxd9P28357 Gm23961-201ENSMUST00000104685 97 ntBASIC1.39□□□□□ -2.19
Hoxd9P28357 Snord13-201ENSMUST00000157627 104 ntBASIC1.39□□□□□ -2.19
Hoxd9P28357 Gm23558-201ENSMUST00000157823 80 ntBASIC1.39□□□□□ -2.19
Hoxd9P28357 Gm23180-201ENSMUST00000158686 125 ntBASIC1.39□□□□□ -2.19
Hoxd9P28357 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.39□□□□□ -2.19
Hoxd9P28357 Mir7059-201ENSMUST00000184825 59 ntBASIC1.39□□□□□ -2.19
Hoxd9P28357 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.39□□□□□ -2.19
Hoxd9P28357 Gm26338-201ENSMUST00000102372 110 ntBASIC1.38□□□□□ -2.19
Hoxd9P28357 Gm24531-201ENSMUST00000157945 100 ntBASIC1.38□□□□□ -2.19
Hoxd9P28357 Gm23853-201ENSMUST00000158375 104 ntBASIC1.38□□□□□ -2.19
Hoxd9P28357 Gm27980-201ENSMUST00000184094 169 ntBASIC1.38□□□□□ -2.19
Hoxd9P28357 Mir6962-201ENSMUST00000199512 63 ntBASIC1.38□□□□□ -2.19
Hoxd9P28357 Mir717-201ENSMUST00000102259 109 ntBASIC1.37□□□□□ -2.19
Hoxd9P28357 Gm24942-201ENSMUST00000158328 114 ntBASIC1.37□□□□□ -2.19
Hoxd9P28357 Gm22165-201ENSMUST00000158414 103 ntBASIC1.37□□□□□ -2.19
Hoxd9P28357 Gm22565-201ENSMUST00000175540 69 ntBASIC1.37□□□□□ -2.19
Hoxd9P28357 Gm22520-201ENSMUST00000158269 129 ntBASIC1.36□□□□□ -2.19
Hoxd9P28357 Gm23416-201ENSMUST00000175520 95 ntBASIC1.36□□□□□ -2.19
Hoxd9P28357 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.36□□□□□ -2.19
Hoxd9P28357 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
Hoxd9P28357 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.35□□□□□ -2.19
Hoxd9P28357 Gm38274-201ENSMUST00000195689 148 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 164.8 ms