Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Mir1197-201ENSMUST00000117037 120 ntBASIC0.95□□□□□ -2.26
Pcdh1F7BJK1 Gm23636-201ENSMUST00000175070 95 ntBASIC0.95□□□□□ -2.26
Pcdh1F7BJK1 Gm27549-201ENSMUST00000183508 62 ntBASIC0.95□□□□□ -2.26
Pcdh1F7BJK1 Mir6394-201ENSMUST00000184738 99 ntBASIC0.95□□□□□ -2.26
Pcdh1F7BJK1 Snord95-201ENSMUST00000082846 68 ntBASIC0.95□□□□□ -2.26
Pcdh1F7BJK1 Gm24252-201ENSMUST00000083700 132 ntBASIC0.95□□□□□ -2.26
Pcdh1F7BJK1 Gm23340-201ENSMUST00000158955 123 ntBASIC0.94□□□□□ -2.26
Pcdh1F7BJK1 Gm22095-201ENSMUST00000158984 150 ntBASIC0.94□□□□□ -2.26
Pcdh1F7BJK1 Mir3108-201ENSMUST00000175500 79 ntBASIC0.94□□□□□ -2.26
Pcdh1F7BJK1 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.94□□□□□ -2.26
Pcdh1F7BJK1 Gm26438-201ENSMUST00000082593 107 ntBASIC0.94□□□□□ -2.26
Pcdh1F7BJK1 Gm25894-201ENSMUST00000083458 75 ntBASIC0.94□□□□□ -2.26
Pcdh1F7BJK1 Gm24431-201ENSMUST00000104073 66 ntBASIC0.93□□□□□ -2.26
Pcdh1F7BJK1 Gm23761-201ENSMUST00000158347 104 ntBASIC0.93□□□□□ -2.26
Pcdh1F7BJK1 Gm24321-201ENSMUST00000175348 80 ntBASIC0.93□□□□□ -2.26
Pcdh1F7BJK1 Gm24020-201ENSMUST00000180156 108 ntBASIC0.93□□□□□ -2.26
Pcdh1F7BJK1 Mir22-201ENSMUST00000083595 95 ntBASIC0.93□□□□□ -2.26
Pcdh1F7BJK1 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Pcdh1F7BJK1 Mir741-201ENSMUST00000103931 71 ntBASIC0.92□□□□□ -2.26
Pcdh1F7BJK1 Gm25768-201ENSMUST00000158570 98 ntBASIC0.92□□□□□ -2.26
Pcdh1F7BJK1 Gm29432-201ENSMUST00000185397 139 ntBASIC0.92□□□□□ -2.26
Pcdh1F7BJK1 DQ267101-201ENSMUST00000082562 73 ntBASIC0.92□□□□□ -2.26
Pcdh1F7BJK1 Gm24342-201ENSMUST00000103907 104 ntBASIC0.91□□□□□ -2.26
Pcdh1F7BJK1 Gm24942-201ENSMUST00000158328 114 ntBASIC0.91□□□□□ -2.26
Pcdh1F7BJK1 Mir344-201ENSMUST00000083634 95 ntBASIC0.91□□□□□ -2.26
Pcdh1F7BJK1 Snord35a-201ENSMUST00000083884 90 ntBASIC0.91□□□□□ -2.26
Pcdh1F7BJK1 Mir669h-201ENSMUST00000116944 125 ntBASIC0.9□□□□□ -2.27
Pcdh1F7BJK1 Gm24678-201ENSMUST00000158756 104 ntBASIC0.9□□□□□ -2.27
Pcdh1F7BJK1 Gm22565-201ENSMUST00000175540 69 ntBASIC0.9□□□□□ -2.27
Pcdh1F7BJK1 Mir6985-201ENSMUST00000184641 61 ntBASIC0.9□□□□□ -2.27
Pcdh1F7BJK1 Gm42506-201ENSMUST00000202009 150 ntBASIC0.9□□□□□ -2.27
Pcdh1F7BJK1 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.9□□□□□ -2.27
Pcdh1F7BJK1 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.89□□□□□ -2.27
Pcdh1F7BJK1 Mir695-201ENSMUST00000102261 109 ntBASIC0.89□□□□□ -2.27
Pcdh1F7BJK1 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Pcdh1F7BJK1 Gm25496-201ENSMUST00000104430 120 ntBASIC0.89□□□□□ -2.27
Pcdh1F7BJK1 Gm23893-201ENSMUST00000158106 134 ntBASIC0.89□□□□□ -2.27
Pcdh1F7BJK1 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.89□□□□□ -2.27
Pcdh1F7BJK1 Mir196b-201ENSMUST00000083509 85 ntBASIC0.89□□□□□ -2.27
Pcdh1F7BJK1 Gm25683-201ENSMUST00000083940 131 ntBASIC0.89□□□□□ -2.27
Pcdh1F7BJK1 Mir3064-201ENSMUST00000175532 67 ntBASIC0.88□□□□□ -2.27
Pcdh1F7BJK1 Gm23726-201ENSMUST00000178937 67 ntBASIC0.88□□□□□ -2.27
Pcdh1F7BJK1 Gm45655-201ENSMUST00000211625 160 ntBASIC0.88□□□□□ -2.27
Pcdh1F7BJK1 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.88□□□□□ -2.27
Pcdh1F7BJK1 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Pcdh1F7BJK1 Gm25055-201ENSMUST00000157369 76 ntBASIC0.87□□□□□ -2.27
Pcdh1F7BJK1 Gm25656-201ENSMUST00000158466 66 ntBASIC0.87□□□□□ -2.27
Pcdh1F7BJK1 Gm27943-201ENSMUST00000184844 116 ntBASIC0.87□□□□□ -2.27
Pcdh1F7BJK1 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.87□□□□□ -2.27
Pcdh1F7BJK1 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Pcdh1F7BJK1 Gm26485-201ENSMUST00000158019 64 ntBASIC0.86□□□□□ -2.27
Pcdh1F7BJK1 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Pcdh1F7BJK1 Gm44458-201ENSMUST00000196594 143 ntBASIC0.86□□□□□ -2.27
Pcdh1F7BJK1 Gm23477-201ENSMUST00000158882 128 ntBASIC0.85□□□□□ -2.27
Pcdh1F7BJK1 Gm27980-201ENSMUST00000184094 169 ntBASIC0.85□□□□□ -2.27
Pcdh1F7BJK1 Gm24918-201ENSMUST00000083022 130 ntBASIC0.85□□□□□ -2.27
Pcdh1F7BJK1 Gm23785-201ENSMUST00000116741 96 ntBASIC0.84□□□□□ -2.27
Pcdh1F7BJK1 Gm25847-201ENSMUST00000116793 96 ntBASIC0.84□□□□□ -2.27
Pcdh1F7BJK1 Gm24378-201ENSMUST00000122699 106 ntBASIC0.84□□□□□ -2.27
Pcdh1F7BJK1 Gm42677-201ENSMUST00000196363 127 ntBASIC0.84□□□□□ -2.27
Pcdh1F7BJK1 Gm44455-201ENSMUST00000200061 82 ntBASIC0.84□□□□□ -2.27
Pcdh1F7BJK1 Gm26338-201ENSMUST00000102372 110 ntBASIC0.83□□□□□ -2.28
Pcdh1F7BJK1 Gm14533-201ENSMUST00000117088 93 ntBASIC0.83□□□□□ -2.28
Pcdh1F7BJK1 Gm11966-201ENSMUST00000119907 87 ntBASIC0.83□□□□□ -2.28
Pcdh1F7BJK1 Gm25715-201ENSMUST00000158627 125 ntBASIC0.83□□□□□ -2.28
Pcdh1F7BJK1 Gm38274-201ENSMUST00000195689 148 ntBASIC0.83□□□□□ -2.28
Pcdh1F7BJK1 Gm44327-201ENSMUST00000200068 117 ntBASIC0.83□□□□□ -2.28
Pcdh1F7BJK1 Mir200a-201ENSMUST00000083466 90 ntBASIC0.83□□□□□ -2.28
Pcdh1F7BJK1 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Pcdh1F7BJK1 Gm23826-201ENSMUST00000157394 119 ntBASIC0.81□□□□□ -2.28
Pcdh1F7BJK1 Gm44301-201ENSMUST00000200362 143 ntBASIC0.81□□□□□ -2.28
Pcdh1F7BJK1 Gm23347-201ENSMUST00000083823 82 ntBASIC0.81□□□□□ -2.28
Pcdh1F7BJK1 Gm27937-201ENSMUST00000183605 88 ntBASIC0.8□□□□□ -2.28
Pcdh1F7BJK1 Mir7663-201ENSMUST00000183950 61 ntBASIC0.8□□□□□ -2.28
Pcdh1F7BJK1 Gm22303-201ENSMUST00000082686 122 ntBASIC0.8□□□□□ -2.28
Pcdh1F7BJK1 Gm27289-201ENSMUST00000183341 82 ntBASIC0.79□□□□□ -2.28
Pcdh1F7BJK1 Mir6364-201ENSMUST00000183396 86 ntBASIC0.79□□□□□ -2.28
Pcdh1F7BJK1 Mir7673-201ENSMUST00000184567 64 ntBASIC0.79□□□□□ -2.28
Pcdh1F7BJK1 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.79□□□□□ -2.28
Pcdh1F7BJK1 Snord33-201ENSMUST00000083694 84 ntBASIC0.79□□□□□ -2.28
Pcdh1F7BJK1 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Pcdh1F7BJK1 Gm25378-201ENSMUST00000104333 129 ntBASIC0.78□□□□□ -2.28
Pcdh1F7BJK1 Gm25506-201ENSMUST00000104339 70 ntBASIC0.78□□□□□ -2.28
Pcdh1F7BJK1 Gm24288-201ENSMUST00000157630 144 ntBASIC0.78□□□□□ -2.28
Pcdh1F7BJK1 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.78□□□□□ -2.28
Pcdh1F7BJK1 Gm25354-201ENSMUST00000179110 105 ntBASIC0.78□□□□□ -2.28
Pcdh1F7BJK1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Pcdh1F7BJK1 Gm27554-201ENSMUST00000185074 98 ntBASIC0.78□□□□□ -2.28
Pcdh1F7BJK1 Gm22689-201ENSMUST00000102452 110 ntBASIC0.77□□□□□ -2.29
Pcdh1F7BJK1 Gm22720-201ENSMUST00000122710 87 ntBASIC0.77□□□□□ -2.29
Pcdh1F7BJK1 Gm25307-201ENSMUST00000158885 106 ntBASIC0.77□□□□□ -2.29
Pcdh1F7BJK1 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Pcdh1F7BJK1 Gm22459-201ENSMUST00000082577 108 ntBASIC0.77□□□□□ -2.29
Pcdh1F7BJK1 Mir362-201ENSMUST00000093592 65 ntBASIC0.77□□□□□ -2.29
Pcdh1F7BJK1 Gm22469-201ENSMUST00000104118 133 ntBASIC0.76□□□□□ -2.29
Pcdh1F7BJK1 Gm26007-201ENSMUST00000158798 120 ntBASIC0.76□□□□□ -2.29
Pcdh1F7BJK1 Gm27977-201ENSMUST00000185159 111 ntBASIC0.76□□□□□ -2.29
Pcdh1F7BJK1 Mir7229-201ENSMUST00000197062 53 ntBASIC0.76□□□□□ -2.29
Pcdh1F7BJK1 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.76□□□□□ -2.29
Pcdh1F7BJK1 Mir27b-201ENSMUST00000083541 73 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 179.6 ms