Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
PdfS4R2K0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13□□□□□ -0.33
PdfS4R2K0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
PdfS4R2K0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PdfS4R2K0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13□□□□□ -0.33
PdfS4R2K0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
PdfS4R2K0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PdfS4R2K0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
PdfS4R2K0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.99□□□□□ -0.33
PdfS4R2K0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
PdfS4R2K0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.99□□□□□ -0.33
PdfS4R2K0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Gm6365-201ENSMUST00000054711 744 ntBASIC12.99□□□□□ -0.33
PdfS4R2K0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PdfS4R2K0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.99□□□□□ -0.33
PdfS4R2K0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
PdfS4R2K0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
PdfS4R2K0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PdfS4R2K0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PdfS4R2K0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
PdfS4R2K0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.98□□□□□ -0.33
PdfS4R2K0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.98□□□□□ -0.33
PdfS4R2K0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.98□□□□□ -0.33
PdfS4R2K0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
PdfS4R2K0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PdfS4R2K0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PdfS4R2K0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.97□□□□□ -0.33
PdfS4R2K0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.97□□□□□ -0.33
PdfS4R2K0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PdfS4R2K0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PdfS4R2K0 Gm6420-201ENSMUST00000193885 723 ntBASIC12.97□□□□□ -0.33
PdfS4R2K0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
PdfS4R2K0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
PdfS4R2K0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.97□□□□□ -0.33
PdfS4R2K0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
PdfS4R2K0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PdfS4R2K0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PdfS4R2K0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms