Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
H2afb2S4R1M3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
H2afb2S4R1M3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
H2afb2S4R1M3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
H2afb2S4R1M3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
H2afb2S4R1M3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
H2afb2S4R1M3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
H2afb2S4R1M3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb2S4R1M3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Gm18958-201ENSMUST00000174258 762 ntBASIC16.88■□□□□ 0.29
H2afb2S4R1M3 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.88■□□□□ 0.29
H2afb2S4R1M3 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H2afb2S4R1M3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Gm27463-201ENSMUST00000183569 57 ntBASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H2afb2S4R1M3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms