Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nek4Q9Z1J2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.59■□□□□ 0.89
Nek4Q9Z1J2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nek4Q9Z1J2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nek4Q9Z1J2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nek4Q9Z1J2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nek4Q9Z1J2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nek4Q9Z1J2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
Nek4Q9Z1J2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nek4Q9Z1J2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Mir1199-201ENSMUST00000117015 119 ntBASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Gm7638-201ENSMUST00000121348 967 ntBASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek4Q9Z1J2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Gm38027-201ENSMUST00000192315 235 ntBASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek4Q9Z1J2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nek4Q9Z1J2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Gm27000-201ENSMUST00000182943 842 ntBASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Gm9731-201ENSMUST00000209480 747 ntBASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek4Q9Z1J2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nek4Q9Z1J2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek4Q9Z1J2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nek4Q9Z1J2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nek4Q9Z1J2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek4Q9Z1J2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek4Q9Z1J2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms