Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn9Q9Z0S7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Gm13216-201ENSMUST00000117145 591 ntBASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Gm27000-201ENSMUST00000182943 842 ntBASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Gm3375-201ENSMUST00000203929 796 ntBASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn9Q9Z0S7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Gm7791-201ENSMUST00000219066 539 ntBASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.23■□□□□ 0.19
Cldn9Q9Z0S7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms