Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nubp1Q9R060 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nubp1Q9R060 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.76□□□□□ -0.05
Nubp1Q9R060 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 AC125117.2-201ENSMUST00000228344 1140 ntBASIC14.76□□□□□ -0.05
Nubp1Q9R060 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nubp1Q9R060 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.75□□□□□ -0.05
Nubp1Q9R060 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.75□□□□□ -0.05
Nubp1Q9R060 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Actl10-202ENSMUST00000226583 1501 ntBASIC14.75□□□□□ -0.05
Nubp1Q9R060 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Nubp1Q9R060 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nubp1Q9R060 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.74□□□□□ -0.05
Nubp1Q9R060 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Olfr129-201ENSMUST00000122318 993 ntBASIC14.74□□□□□ -0.05
Nubp1Q9R060 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Gm18206-201ENSMUST00000207027 926 ntBASIC14.74□□□□□ -0.05
Nubp1Q9R060 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.74□□□□□ -0.05
Nubp1Q9R060 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.74□□□□□ -0.05
Nubp1Q9R060 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nubp1Q9R060 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.74□□□□□ -0.05
Nubp1Q9R060 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.73□□□□□ -0.05
Nubp1Q9R060 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Gm12895-201ENSMUST00000122214 226 ntBASIC14.73□□□□□ -0.05
Nubp1Q9R060 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Gm10052-201ENSMUST00000168019 960 ntBASIC14.73□□□□□ -0.05
Nubp1Q9R060 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nubp1Q9R060 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms