Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf4Q9QZS2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Gm13234-201ENSMUST00000120010 747 ntBASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf4Q9QZS2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Nespas-201ENSMUST00000143738 1083 ntBASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Gm6420-201ENSMUST00000193885 723 ntBASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Gm43017-201ENSMUST00000198296 752 ntBASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf4Q9QZS2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Mir2861-201ENSMUST00000175539 82 ntBASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf4Q9QZS2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf4Q9QZS2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf4Q9QZS2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf4Q9QZS2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf4Q9QZS2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf4Q9QZS2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf4Q9QZS2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf4Q9QZS2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms