Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a2Q9JLR1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a2Q9JLR1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a2Q9JLR1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a2Q9JLR1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Mir6982-201ENSMUST00000184354 68 ntBASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sec61a2Q9JLR1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sec61a2Q9JLR1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms