Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tlr9Q9EQU3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tlr9Q9EQU3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tlr9Q9EQU3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tlr9Q9EQU3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.77■□□□□ 0.44
Tlr9Q9EQU3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tlr9Q9EQU3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tlr9Q9EQU3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tlr9Q9EQU3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Tlr9Q9EQU3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tlr9Q9EQU3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tlr9Q9EQU3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tlr9Q9EQU3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tlr9Q9EQU3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Tlr9Q9EQU3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tlr9Q9EQU3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tlr9Q9EQU3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tlr9Q9EQU3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Gm10418-201ENSMUST00000100943 576 ntBASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr9Q9EQU3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr9Q9EQU3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr9Q9EQU3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms