Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clca3a2Q9EQR4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clca3a2Q9EQR4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
Clca3a2Q9EQR4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Clca3a2Q9EQR4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Clca3a2Q9EQR4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Clca3a2Q9EQR4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Gm13474-201ENSMUST00000122466 815 ntBASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Gm7370-201ENSMUST00000219471 767 ntBASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clca3a2Q9EQR4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clca3a2Q9EQR4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Mir6982-201ENSMUST00000184354 68 ntBASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Gm43799-201ENSMUST00000201845 579 ntBASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clca3a2Q9EQR4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 Gm15565-201ENSMUST00000118890 427 ntBASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clca3a2Q9EQR4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms