Protein–RNA interactions for Protein: Q9DCK3

Tspan4, Tetraspanin-4, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan4Q9DCK3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tspan4Q9DCK3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.33□□□□□ -0.12
Tspan4Q9DCK3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.33□□□□□ -0.12
Tspan4Q9DCK3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tspan4Q9DCK3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tspan4Q9DCK3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tspan4Q9DCK3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tspan4Q9DCK3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.32□□□□□ -0.12
Tspan4Q9DCK3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tspan4Q9DCK3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Gm13146-201ENSMUST00000118508 780 ntBASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Gm38205-201ENSMUST00000192243 258 ntBASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tspan4Q9DCK3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Gm7860-201ENSMUST00000121190 879 ntBASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tspan4Q9DCK3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tspan4Q9DCK3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tspan4Q9DCK3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tspan4Q9DCK3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tspan4Q9DCK3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms