Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne8Q9DC53 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Gm8520-201ENSMUST00000186517 868 ntBASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Cpne8Q9DC53 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne8Q9DC53 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Gm3375-201ENSMUST00000203929 796 ntBASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne8Q9DC53 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.6■□□□□ 0.41
Cpne8Q9DC53 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.6■□□□□ 0.41
Cpne8Q9DC53 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms