Protein–RNA interactions for Protein: Q9DAW6

Prpf4, U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4Q9DAW6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf4Q9DAW6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf4Q9DAW6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf4Q9DAW6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Prpf4Q9DAW6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf4Q9DAW6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Prpf4Q9DAW6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Gm42569-201ENSMUST00000200539 472 ntBASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf4Q9DAW6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf4Q9DAW6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Gm4968-201ENSMUST00000071458 858 ntBASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Prpf4Q9DAW6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms