Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tube1Q9D6T1 AA414768-201ENSMUST00000121924 1257 ntBASIC18.8■□□□□ 0.6
Tube1Q9D6T1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.8■□□□□ 0.6
Tube1Q9D6T1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tube1Q9D6T1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tube1Q9D6T1 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.8■□□□□ 0.6
Tube1Q9D6T1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tube1Q9D6T1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tube1Q9D6T1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tube1Q9D6T1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Gm7367-201ENSMUST00000057611 492 ntBASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Tube1Q9D6T1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Gm9731-201ENSMUST00000209480 747 ntBASIC18.78■□□□□ 0.6
Tube1Q9D6T1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tube1Q9D6T1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 Gm37025-201ENSMUST00000195159 829 ntBASIC18.77■□□□□ 0.6
Tube1Q9D6T1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tube1Q9D6T1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tube1Q9D6T1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tube1Q9D6T1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.77■□□□□ 0.59
Tube1Q9D6T1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tube1Q9D6T1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tube1Q9D6T1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Gm6345-202ENSMUST00000180900 204 ntBASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.76■□□□□ 0.59
Tube1Q9D6T1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Gm10819-201ENSMUST00000099988 561 ntBASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tube1Q9D6T1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Gm13474-201ENSMUST00000122466 815 ntBASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.75■□□□□ 0.59
Tube1Q9D6T1 Gm7370-201ENSMUST00000219471 767 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms