Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.54■□□□□ 0.56
Cfap53Q9D439 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Gm21814-202ENSMUST00000203277 873 ntBASIC18.54■□□□□ 0.56
Cfap53Q9D439 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap53Q9D439 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Il3ra-202ENSMUST00000223589 738 ntBASIC18.53■□□□□ 0.56
Cfap53Q9D439 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap53Q9D439 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.52■□□□□ 0.56
Cfap53Q9D439 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.52■□□□□ 0.56
Cfap53Q9D439 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.52■□□□□ 0.56
Cfap53Q9D439 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap53Q9D439 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap53Q9D439 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap53Q9D439 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap53Q9D439 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap53Q9D439 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Cfap53Q9D439 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap53Q9D439 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.52■□□□□ 0.55
Cfap53Q9D439 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap53Q9D439 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Gm27463-201ENSMUST00000183569 57 ntBASIC18.51■□□□□ 0.55
Cfap53Q9D439 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.51■□□□□ 0.55
Cfap53Q9D439 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap53Q9D439 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.51■□□□□ 0.55
Cfap53Q9D439 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms