Protein–RNA interactions for Protein: Q9CXZ1

Ndufs4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufs4Q9CXZ1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufs4Q9CXZ1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Gm2274-201ENSMUST00000184539 609 ntBASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufs4Q9CXZ1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ndufs4Q9CXZ1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Mir7071-201ENSMUST00000184847 69 ntBASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufs4Q9CXZ1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufs4Q9CXZ1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Gm6433-201ENSMUST00000118634 875 ntBASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufs4Q9CXZ1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufs4Q9CXZ1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufs4Q9CXZ1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ndufs4Q9CXZ1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.11■□□□□ 0.17
Ndufs4Q9CXZ1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndufs4Q9CXZ1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms