Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx47Q9CWX9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx47Q9CWX9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx47Q9CWX9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx47Q9CWX9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ddx47Q9CWX9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx47Q9CWX9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ddx47Q9CWX9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx47Q9CWX9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ddx47Q9CWX9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.43■□□□□ 0.38
Ddx47Q9CWX9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx47Q9CWX9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx47Q9CWX9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx47Q9CWX9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.39■□□□□ 0.37
Ddx47Q9CWX9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx47Q9CWX9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ddx47Q9CWX9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx47Q9CWX9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ddx47Q9CWX9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx47Q9CWX9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms