Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc3Q9CWU5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Gm38027-201ENSMUST00000192315 235 ntBASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Khdc3Q9CWU5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Khdc3Q9CWU5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Gm17661-201ENSMUST00000170317 270 ntBASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Khdc3Q9CWU5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Khdc3Q9CWU5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Khdc3Q9CWU5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Khdc3Q9CWU5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Khdc3Q9CWU5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Khdc3Q9CWU5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Gm7638-201ENSMUST00000121348 967 ntBASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc3Q9CWU5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc3Q9CWU5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms