Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf135Q9CWS1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf135Q9CWS1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Gm43183-201ENSMUST00000200632 547 ntBASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf135Q9CWS1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Gm9987-201ENSMUST00000069768 567 ntBASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf135Q9CWS1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Gm24841-201ENSMUST00000158676 357 ntBASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf135Q9CWS1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf135Q9CWS1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf135Q9CWS1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rnf135Q9CWS1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rnf135Q9CWS1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rnf135Q9CWS1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf135Q9CWS1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf135Q9CWS1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.58■□□□□ 0.4
Rnf135Q9CWS1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Mir5122-201ENSMUST00000175004 89 ntBASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms