Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Gm12527-201ENSMUST00000117967 564 ntBASIC19.88■□□□□ 0.77
Smc3Q9CW03 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc3Q9CW03 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.87■□□□□ 0.77
Smc3Q9CW03 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc3Q9CW03 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.86■□□□□ 0.77
Smc3Q9CW03 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Smc3Q9CW03 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc3Q9CW03 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.85■□□□□ 0.77
Smc3Q9CW03 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc3Q9CW03 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.84■□□□□ 0.77
Smc3Q9CW03 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.84■□□□□ 0.77
Smc3Q9CW03 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms