Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc43Q9CR29 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc43Q9CR29 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc43Q9CR29 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Gm10812-201ENSMUST00000099864 546 ntBASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc43Q9CR29 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc43Q9CR29 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc43Q9CR29 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc43Q9CR29 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc43Q9CR29 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc43Q9CR29 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc43Q9CR29 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Mir1199-201ENSMUST00000117015 119 ntBASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc43Q9CR29 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms