Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Retreg3Q9CQV4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Gm18958-201ENSMUST00000174258 762 ntBASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retreg3Q9CQV4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Gm2274-201ENSMUST00000184539 609 ntBASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retreg3Q9CQV4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retreg3Q9CQV4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retreg3Q9CQV4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retreg3Q9CQV4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retreg3Q9CQV4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms