Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm7Q9CQQ8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm7Q9CQQ8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm7Q9CQQ8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm7Q9CQQ8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm7Q9CQQ8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Gm37722-201ENSMUST00000193757 208 ntBASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.08■□□□□ 0.32
Lsm7Q9CQQ8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm7Q9CQQ8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Gm7284-201ENSMUST00000131667 944 ntBASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm7Q9CQQ8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms