Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Gm43173-201ENSMUST00000202246 593 ntBASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Gm40848-201ENSMUST00000221998 324 ntBASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RTRAFQ9CQE8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Gm26833-201ENSMUST00000180899 440 ntBASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RTRAFQ9CQE8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RTRAFQ9CQE8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RTRAFQ9CQE8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms