Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afb1Q9CQ70 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Gm9731-201ENSMUST00000209480 747 ntBASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afb1Q9CQ70 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb1Q9CQ70 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms