Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Gm44549-201ENSMUST00000208351 577 ntBASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Gm18671-201ENSMUST00000214826 683 ntBASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Krt88Q9CPR6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Gm11643-201ENSMUST00000119578 864 ntBASIC15.28■□□□□ 0.04
Krt88Q9CPR6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Krt88Q9CPR6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Gm42642-201ENSMUST00000200683 355 ntBASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Gm10033-202ENSMUST00000211874 928 ntBASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Krt88Q9CPR6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt88Q9CPR6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Krt88Q9CPR6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.27■□□□□ 0.03
Krt88Q9CPR6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt88Q9CPR6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt88Q9CPR6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Krt88Q9CPR6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt88Q9CPR6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.27■□□□□ 0.03
Krt88Q9CPR6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Krt88Q9CPR6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt88Q9CPR6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms