Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim33Q99PP7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Trim33Q99PP7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim33Q99PP7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim33Q99PP7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim33Q99PP7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim33Q99PP7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Gm17661-201ENSMUST00000170317 270 ntBASIC16.75■□□□□ 0.27
Trim33Q99PP7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim33Q99PP7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim33Q99PP7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Trim33Q99PP7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Gm9731-201ENSMUST00000209480 747 ntBASIC16.74■□□□□ 0.27
Trim33Q99PP7 Gm30025-201ENSMUST00000218555 728 ntBASIC16.74■□□□□ 0.27
Trim33Q99PP7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim33Q99PP7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim33Q99PP7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms