Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh15Q99PJ1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh15Q99PJ1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh15Q99PJ1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Grk6-206ENSMUST00000224995 2971 ntBASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.15■□□□□ 0.66
Pcdh15Q99PJ1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh15Q99PJ1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh15Q99PJ1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh15Q99PJ1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.14■□□□□ 0.66
Pcdh15Q99PJ1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdh15Q99PJ1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh15Q99PJ1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms