Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh23Q99PF4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Gm14701-201ENSMUST00000117156 348 ntBASIC17.23■□□□□ 0.35
Cdh23Q99PF4 AV026068-213ENSMUST00000223675 1171 ntBASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh23Q99PF4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Gm44450-201ENSMUST00000199528 114 ntBASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Gm13036-201ENSMUST00000117799 748 ntBASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Cdh23Q99PF4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Gm4535-201ENSMUST00000182274 558 ntBASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Mir6956-201ENSMUST00000183598 62 ntBASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Gm10355-201ENSMUST00000097146 517 ntBASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.21■□□□□ 0.35
Cdh23Q99PF4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdh23Q99PF4 BC021767-201ENSMUST00000126387 1716 ntBASIC17.21■□□□□ 0.34
Cdh23Q99PF4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdh23Q99PF4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Gm27628-201ENSMUST00000184911 107 ntBASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdh23Q99PF4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms