Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.18■□□□□ 0.02
Raf1Q99N57 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Raf1Q99N57 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Raf1Q99N57 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.18■□□□□ 0.02
Raf1Q99N57 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Raf1Q99N57 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raf1Q99N57 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.17■□□□□ 0.02
Raf1Q99N57 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Raf1Q99N57 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Raf1Q99N57 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Gm13216-201ENSMUST00000117145 591 ntBASIC15.17■□□□□ 0.02
Raf1Q99N57 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Raf1Q99N57 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.17■□□□□ 0.02
Raf1Q99N57 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.17■□□□□ 0.02
Raf1Q99N57 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Raf1Q99N57 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raf1Q99N57 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Raf1Q99N57 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Raf1Q99N57 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.16■□□□□ 0.02
Raf1Q99N57 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Raf1Q99N57 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Raf1Q99N57 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Raf1Q99N57 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Raf1Q99N57 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raf1Q99N57 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.15■□□□□ 0.02
Raf1Q99N57 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Raf1Q99N57 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.15■□□□□ 0.02
Raf1Q99N57 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Raf1Q99N57 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.15■□□□□ 0.02
Raf1Q99N57 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Raf1Q99N57 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Raf1Q99N57 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.15■□□□□ 0.02
Raf1Q99N57 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raf1Q99N57 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Raf1Q99N57 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Gm15565-201ENSMUST00000118890 427 ntBASIC15.14■□□□□ 0.01
Raf1Q99N57 Gm15378-201ENSMUST00000121894 207 ntBASIC15.14■□□□□ 0.01
Raf1Q99N57 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.14■□□□□ 0.01
Raf1Q99N57 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Gm44549-201ENSMUST00000208351 577 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms