Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col25a1Q99MQ5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Gm25911-201ENSMUST00000157621 56 ntBASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Il3ra-202ENSMUST00000223589 738 ntBASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col25a1Q99MQ5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col25a1Q99MQ5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col25a1Q99MQ5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col25a1Q99MQ5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Gm9727-201ENSMUST00000161387 555 ntBASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms