Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Tlr3Q99MB1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tlr3Q99MB1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tlr3Q99MB1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Gm11539-201ENSMUST00000119837 557 ntBASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Gm13436-201ENSMUST00000120418 567 ntBASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Gm27000-201ENSMUST00000182943 842 ntBASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Gm21362-201ENSMUST00000194272 928 ntBASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tlr3Q99MB1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Tlr3Q99MB1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tlr3Q99MB1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Tlr3Q99MB1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tlr3Q99MB1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Gm18958-201ENSMUST00000174258 762 ntBASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tlr3Q99MB1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.14■□□□□ 0.49
Tlr3Q99MB1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Gm7889-201ENSMUST00000185591 958 ntBASIC18.13■□□□□ 0.49
Tlr3Q99MB1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tlr3Q99MB1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Gm7367-201ENSMUST00000057611 492 ntBASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Tlr3Q99MB1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms