Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.8□□□□□ -0.04
Scrt1Q99M85 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scrt1Q99M85 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.79□□□□□ -0.04
Scrt1Q99M85 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.79□□□□□ -0.04
Scrt1Q99M85 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Gm26039-201ENSMUST00000158152 144 ntBASIC14.79□□□□□ -0.04
Scrt1Q99M85 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Gm27357-201ENSMUST00000183754 135 ntBASIC14.79□□□□□ -0.04
Scrt1Q99M85 AW822252-206ENSMUST00000208904 237 ntBASIC14.79□□□□□ -0.04
Scrt1Q99M85 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scrt1Q99M85 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Mir770-201ENSMUST00000103252 94 ntBASIC14.78□□□□□ -0.04
Scrt1Q99M85 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Gm5864-201ENSMUST00000202263 970 ntBASIC14.78□□□□□ -0.04
Scrt1Q99M85 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scrt1Q99M85 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scrt1Q99M85 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Scrt1Q99M85 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scrt1Q99M85 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scrt1Q99M85 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scrt1Q99M85 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Scrt1Q99M85 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Scrt1Q99M85 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms