Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Gm15165-201ENSMUST00000118140 502 ntBASIC17.82■□□□□ 0.44
Clp1Q99LI9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.82■□□□□ 0.44
Clp1Q99LI9 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.82■□□□□ 0.44
Clp1Q99LI9 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.82■□□□□ 0.44
Clp1Q99LI9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.82■□□□□ 0.44
Clp1Q99LI9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44357-201ENSMUST00000195897 142 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm19658-201ENSMUST00000196231 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44367-201ENSMUST00000196836 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44350-201ENSMUST00000197197 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44390-201ENSMUST00000197533 144 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44313-201ENSMUST00000198018 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44486-201ENSMUST00000198508 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44454-201ENSMUST00000198541 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44314-201ENSMUST00000199263 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44394-201ENSMUST00000199558 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44484-201ENSMUST00000199873 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44466-201ENSMUST00000200264 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Gm44359-201ENSMUST00000200671 138 ntBASIC17.81■□□□□ 0.44
Clp1Q99LI9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clp1Q99LI9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Gm27867-201ENSMUST00000184778 125 ntBASIC17.8■□□□□ 0.44
Clp1Q99LI9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.8■□□□□ 0.44
Clp1Q99LI9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clp1Q99LI9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Clp1Q99LI9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.79■□□□□ 0.44
Clp1Q99LI9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.79■□□□□ 0.44
Clp1Q99LI9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.79■□□□□ 0.44
Clp1Q99LI9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clp1Q99LI9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Mir5131-201ENSMUST00000175426 93 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms